RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 AURKBQ96GD4 344 aaPredicted RBP12.56□□□□□ -0.4
SMC1A-204ENST00000463684 ANKRD27Q96NW4 1050 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 TUBB1Q9H4B7 451 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 MOV10Q9HCE1 1003 aaKnown RBP12.56□□□□□ -0.4
SMC1A-204ENST00000463684 DYNLRB1Q9NP97 96 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 EXD2Q9NVH0 621 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 OXSMQ9NWU1 459 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 GRIP1Q9Y3R0 1128 aa12.56□□□□□ -0.4
SMC1A-204ENST00000463684 TMED7-TICAM2A0A0A6YYA0 188 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 LYPLA1O75608 230 aaPredicted RBP12.55□□□□□ -0.4
SMC1A-204ENST00000463684 RGS9O75916 674 aaPredicted RBP12.55□□□□□ -0.4
SMC1A-204ENST00000463684 ABHD2P08910 425 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 CPA3P15088 417 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 CCT5P48643 541 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 IDH2P48735 452 aaKnown RBP12.55□□□□□ -0.4
SMC1A-204ENST00000463684 KHKP50053 298 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 RPS26P62854 115 aaKnown RBP12.55□□□□□ -0.4
SMC1A-204ENST00000463684 OTUD3Q5T2D3 398 aaPredicted RBP12.55□□□□□ -0.4
SMC1A-204ENST00000463684 PAQR6Q6TCH4 344 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 SYT10Q6XYQ8 523 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 C6orf120Q7Z4R8 191 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 SPATA21Q7Z572 469 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 PEG10Q86TG7 708 aaKnown RBP12.55□□□□□ -0.4
SMC1A-204ENST00000463684 SVOPLQ8N434 492 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 ARFGAP2Q8N6H7 521 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 FAM71CQ8NEG0 241 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 NUP37Q8NFH4 326 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 OR1K1Q8NGR3 316 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 COQ8BQ96D53 544 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 JMJD8Q96S16 334 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 DOK1Q99704 481 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 RBM4Q9BWF3 364 aaKnown RBP12.55□□□□□ -0.4
SMC1A-204ENST00000463684 ZNF350Q9GZX5 532 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 ZNF442Q9H7R0 627 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 HIF1ANQ9NWT6 349 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 PSMC3IPQ9P2W1 217 aaPredicted RBP12.55□□□□□ -0.4
SMC1A-204ENST00000463684 TBK1Q9UHD2 729 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 TMED7Q9Y3B3 224 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 DNAJC15Q9Y5T4 150 aa12.55□□□□□ -0.4
SMC1A-204ENST00000463684 HEATR1Q9H583 2144 aaKnown RBP12.55□□□□□ -0.4
SMC1A-204ENST00000463684 ZNF587BE7ETH6 402 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 ZNF208O43345 1280 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 PEX11AO75192 247 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 LGI1O95970 557 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 CECR9P0C854 216 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 IMPDH2P12268 514 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 CALCRP30988 508 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 THBS4P35443 961 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 ETF1P62495 437 aaKnown RBP12.54□□□□□ -0.4
SMC1A-204ENST00000463684 MAPK14Q16539 360 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 FAM153CQ494X1 144 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 ATAD3BQ5T9A4 648 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 KANK2Q63ZY3 851 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 EMBQ6PCB8 327 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 OLIG3Q7RTU3 272 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 OR9K2Q8NGE7 335 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 TMEM186Q96B77 213 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 PPP3R2Q96LZ3 170 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 ZNF385AQ96PM9 386 aaKnown RBP12.54□□□□□ -0.4
SMC1A-204ENST00000463684 ZNF317Q96PQ6 595 aaPredicted RBP12.54□□□□□ -0.4
SMC1A-204ENST00000463684 SF3B5Q9BWJ5 86 aaKnown RBP12.54□□□□□ -0.4
SMC1A-204ENST00000463684 EXOSC3Q9NQT5 275 aaKnown RBP12.54□□□□□ -0.4
SMC1A-204ENST00000463684 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.54□□□□□ -0.4
SMC1A-204ENST00000463684 CRNNQ9UBG3 495 aaPredicted RBP12.54□□□□□ -0.4
SMC1A-204ENST00000463684 WDR45Q9Y484 360 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 ARFGEF3Q5TH69 2177 aa12.54□□□□□ -0.4
SMC1A-204ENST00000463684 ARPC4-TTLL3A0A0A6YYG9 625 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 A0A1W2PPM1 405 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 LYNX1G3V0Z9 82 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 PLIN3O60664 434 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 AGR2O95994 175 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 ADRA2AP08913 450 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 LYNX1P0DP58 116 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 PRPS1L1P21108 318 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 POLR2HP52434 150 aaKnown RBP12.53□□□□□ -0.4
SMC1A-204ENST00000463684 MAP2K6P52564 334 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 HILS1P60008 231 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 HBA1P69905 142 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 KCNJ10P78508 379 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 IL1RL1Q01638 556 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 PTGR1Q14914 329 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 TMEM225Q6GV28 225 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 USP43Q70EL4 1123 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 GPAT4Q86UL3 456 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 TEX29Q8N6K0 151 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 FAM169BQ8N8A8 192 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 ZIC4Q8N9L1 334 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 TWIST2Q8WVJ9 160 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 CKAP2Q8WWK9 683 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 XAGE5Q8WWM1 108 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 BCL2L2Q92843 193 aaPredicted RBP12.53□□□□□ -0.4
SMC1A-204ENST00000463684 SLC35G5Q96KT7 338 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 DUSP26Q9BV47 211 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 OR51I1Q9H343 314 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 PIF1Q9H611 641 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 POLE3Q9NRF9 147 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 OSGIN1Q9UJX0 560 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 SPEF1Q9Y4P9 236 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 DYSFO75923 2080 aa12.53□□□□□ -0.4
SMC1A-204ENST00000463684 A0A096LPE4 126 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms