RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 SLC9A8Q9Y2E8 581 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 FLVCR1Q9Y5Y0 555 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 USH1CQ9Y6N9 552 aa18.11■□□□□ 0.49
PDLIM4-205ENST00000463615 ZC3H12DA2A288 527 aaKnown RBP18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 ANP32DO95626 131 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 CRATP43155 626 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 STK11Q15831 433 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 PGGHGQ32M88 737 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 WBP2NLQ6ICG8 309 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 OR7E24Q6IFN5 339 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 DTX2Q86UW9 622 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 VRK2Q86Y07 508 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 KBTBD8Q8NFY9 601 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 OR9I1Q8NGQ6 314 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 TMEM45BQ96B21 275 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 SF3B5Q9BWJ5 86 aaKnown RBP18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 NPAP1Q9NZP6 1156 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 DCTN4Q9UJW0 460 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 ZNF443Q9Y2A4 671 aaPredicted RBP18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 CHST2Q9Y4C5 530 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 SLC25A15Q9Y619 301 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 GMEB1Q9Y692 573 aa18.1■□□□□ 0.49
PDLIM4-205ENST00000463615 LIPT2A6NK58 231 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 SHISA9B4DS77 424 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 BCHEP06276 602 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 CCNA2P20248 432 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 FADDQ13158 208 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 LARS2Q15031 903 aaKnown RBP18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 GTDC1Q4AE62 458 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 C1orf162Q8NEQ5 155 aaPredicted RBP18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 NEUROG1Q92886 237 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 VPS33AQ96AX1 596 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 TRMT61AQ96FX7 289 aaKnown RBP18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 AURKBQ96GD4 344 aaPredicted RBP18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 TMEM19Q96HH6 336 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 BOD1Q96IK1 185 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 SPATA9Q9BWV2 254 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 PAIP1Q9H074 479 aaKnown RBP18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 RAD21L1Q9H4I0 556 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 TMEM45AQ9NWC5 275 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 MGAT4BQ9UQ53 548 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 IFT52Q9Y366 437 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 PCDHB14Q9Y5E9 798 aa18.09■□□□□ 0.49
PDLIM4-205ENST00000463615 ZANQ9Y493 2812 aa18.08■□□□□ 0.49
PDLIM4-205ENST00000463615 PLCE1Q9P212 2302 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 A0A096LPI6 279 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 TMEM247A6NEH6 219 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 IGHV3-9P01782 118 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 GPIP06744 558 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 ITGA5P08648 1049 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 CXCR1P25024 350 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 IDUAP35475 653 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 RGNQ15493 299 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 GABRA6Q16445 453 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 UBE2J2Q8N2K1 259 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 C17orf78Q8N4C9 275 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 TRAF4Q9BUZ4 470 aaPredicted RBP18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 ARMC7Q9H6L4 198 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 A4GALTQ9NPC4 353 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 ZNF232Q9UNY5 417 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 MAGED1Q9Y5V3 778 aaPredicted RBP18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 HIVEP2P31629 2446 aa18.08■□□□□ 0.48
PDLIM4-205ENST00000463615 A0A1W2PP18 115 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 AQP7P3A6NL99 342 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 A8MVM7 634 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 NPIPB7O75200 414 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 RAD51DO75771 328 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 GKN3PP0CG01 181 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 PTAFRP25105 342 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 COPZ1P61923 177 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 IRX1P78414 480 aaPredicted RBP18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 C6orf10Q5SRN2 563 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 LRIF1Q5T3J3 769 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 TMEM108Q6UXF1 575 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 Q71RC1 249 aaPredicted RBP18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 CLIP4Q8N3C7 705 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 ZIC4Q8N9L1 334 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 DNAJA3Q96EY1 480 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 CCDC28BQ9BUN5 200 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 TCF7L2Q9NQB0 619 aa18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 CISD1Q9NZ45 108 aaKnown RBP18.07■□□□□ 0.48
PDLIM4-205ENST00000463615 CIB4A0PJX0 185 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 TMEM229AB2RXF0 380 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 CLIC1O00299 241 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 FZD7O75084 574 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 VAMP5O95183 116 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 CD8AP01732 235 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 P2RY4P51582 365 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 FAPQ12884 760 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 CEACAM7Q14002 265 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 OTUD3Q5T2D3 398 aaPredicted RBP18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 BLOC1S3Q6QNY0 202 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 CASP12Q6UXS9 341 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 DNM1P46Q6ZS02 220 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 FUNDC1Q8IVP5 155 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 TMEM99Q8N816 258 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 STK35Q8TDR2 534 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 SLC52A3Q9NQ40 469 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 SLC7A10Q9NS82 523 aa18.06■□□□□ 0.48
PDLIM4-205ENST00000463615 FAIMQ9NVQ4 179 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms