RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 VRK2Q86Y07 508 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 UBE2J2Q8N2K1 259 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 CLIP4Q8N3C7 705 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 LILRB1Q8NHL6 650 aaPredicted RBP6.43□□□□□ -1.38
PTPRF-210ENST00000463041 SMAP2Q8WU79 429 aaPredicted RBP6.43□□□□□ -1.38
PTPRF-210ENST00000463041 SLC35B4Q969S0 331 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 FBXW5Q969U6 566 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 VPS33AQ96AX1 596 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 TRMT61AQ96FX7 289 aaKnown RBP6.43□□□□□ -1.38
PTPRF-210ENST00000463041 POM121Q96HA1 1249 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 ATP6V1G3Q96LB4 118 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 Q96MF0 132 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 SF3B5Q9BWJ5 86 aaKnown RBP6.43□□□□□ -1.38
PTPRF-210ENST00000463041 SPATA9Q9BWV2 254 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 GRIP2Q9C0E4 1043 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 PAIP1Q9H074 479 aaKnown RBP6.43□□□□□ -1.38
PTPRF-210ENST00000463041 TCF7L2Q9NQB0 619 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 RLIMQ9NVW2 624 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 TAS2R16Q9NYV7 291 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 MGAT4BQ9UQ53 548 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 ZNF443Q9Y2A4 671 aaPredicted RBP6.43□□□□□ -1.38
PTPRF-210ENST00000463041 SLC9A8Q9Y2E8 581 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 GMEB1Q9Y692 573 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 DSPPQ9NZW4 1301 aa6.43□□□□□ -1.38
PTPRF-210ENST00000463041 YLPM1P49750 1951 aaKnown RBP6.42□□□□□ -1.38
PTPRF-210ENST00000463041 LIPT2A6NK58 231 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 A8MVM7 634 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 CLOCKO15516 846 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 VAMP5O95183 116 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 BCHEP06276 602 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 DANCRP0C864 163 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 GKN3PP0CG01 181 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 ETS2P15036 469 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 HOXB4P17483 251 aaPredicted RBP6.42□□□□□ -1.38
PTPRF-210ENST00000463041 PPIBP23284 216 aaKnown RBP6.42□□□□□ -1.38
PTPRF-210ENST00000463041 PAX7P23759 505 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 EDNRAP25101 427 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 PTAFRP25105 342 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 IDUAP35475 653 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 ATP5J2P56134 94 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 RPS4XP62701 263 aaKnown RBP6.42□□□□□ -1.38
PTPRF-210ENST00000463041 LTBQ06643 244 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 BSPH1Q075Z2 132 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 FAPQ12884 760 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 CEACAM7Q14002 265 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 STK11Q15831 433 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 ETFDHQ16134 617 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 GABRA6Q16445 453 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 ZNF311Q5JNZ3 666 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 TMEM225Q6GV28 225 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 SLC2A7Q6PXP3 512 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 KLHL17Q6TDP4 642 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 SEZ6L2Q6UXD5 910 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 TMEM108Q6UXF1 575 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 ZNF836Q6ZNA1 936 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 FUNDC1Q8IVP5 155 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 DEPDC4Q8N2C3 294 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 GOLGA6L1Q8N7Z2 621 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 OR9I1Q8NGQ6 314 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 STK35Q8TDR2 534 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 GTPBP3Q969Y2 492 aaKnown RBP6.42□□□□□ -1.38
PTPRF-210ENST00000463041 SPDL1Q96EA4 605 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 AURKBQ96GD4 344 aaPredicted RBP6.42□□□□□ -1.38
PTPRF-210ENST00000463041 TMEM19Q96HH6 336 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 COX4I2Q96KJ9 171 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 TAPBPLQ9BX59 468 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 TRIM2Q9C040 744 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 RABEP2Q9H5N1 569 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 A4GALTQ9NPC4 353 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 SLCO1B3Q9NPD5 702 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 CISD1Q9NZ45 108 aaKnown RBP6.42□□□□□ -1.38
PTPRF-210ENST00000463041 CCDC167Q9P0B6 97 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 UPB1Q9UBR1 384 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 MALT1Q9UDY8 824 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 DCTN4Q9UJW0 460 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 LAMP3Q9UQV4 416 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 FLVCR1Q9Y5Y0 555 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 ARFGEF3Q5TH69 2177 aa6.42□□□□□ -1.38
PTPRF-210ENST00000463041 A0A1W2PP18 115 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 ZC3H12DA2A288 527 aaKnown RBP6.41□□□□□ -1.38
PTPRF-210ENST00000463041 OR6C65A6NJZ3 312 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 AQP7P3A6NL99 342 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 EVPLLA8MZ36 301 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 HMGB1P1B2RPK0 211 aaPredicted RBP6.41□□□□□ -1.38
PTPRF-210ENST00000463041 C5orf58C9J3I9 102 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 H7C1Q1 480 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 PDLIM1O00151 329 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 RAMP1O60894 148 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 NPIPB7O75200 414 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 AKR7A3O95154 331 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 LY6G6DO95868 133 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 IGHV3-9P01782 118 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 HEXAP06865 529 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 HOXB9P17482 250 aaPredicted RBP6.41□□□□□ -1.38
PTPRF-210ENST00000463041 GPX2P18283 190 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 NCF2P19878 526 aaPredicted RBP6.41□□□□□ -1.38
PTPRF-210ENST00000463041 MPGP29372 298 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 PRKAR1BP31321 381 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 ATP4BP51164 291 aa6.41□□□□□ -1.38
PTPRF-210ENST00000463041 AQP5P55064 265 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms