RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 NOX4Q9NPH5 578 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 MYEF2Q9P2K5 600 aaKnown RBP11.46□□□□□ -0.58
HDAC4-208ENST00000463007 FBXL2Q9UKC9 423 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 EXOGQ9Y2C4 368 aaKnown RBP11.46□□□□□ -0.58
HDAC4-208ENST00000463007 ASB4Q9Y574 426 aa11.46□□□□□ -0.58
HDAC4-208ENST00000463007 A0A1B0GTH9 108 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 PEX14O75381 377 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 DRD2P14416 443 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 M6PRP20645 277 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 CFL1P23528 166 aaKnown RBP11.45□□□□□ -0.58
HDAC4-208ENST00000463007 BMP8BP34820 402 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 NUP62P37198 522 aaPredicted RBP11.45□□□□□ -0.58
HDAC4-208ENST00000463007 ZNF85Q03923 595 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 GRM7Q14831 915 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 STPG1Q5TH74 334 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 ABHD17CQ6PCB6 329 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 C3P1Q6ZMU1 363 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 PRSS42Q7Z5A4 293 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 BMP8AQ7Z5Y6 402 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 HDDC3Q8N4P3 179 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 OR6M1Q8NGM8 313 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 OR10G6Q8NH81 332 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 ST8SIA4Q92187 359 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 TTC9Q92623 222 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 FGF14Q92915 247 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 FBXW5Q969U6 566 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 ELSPBP1Q96BH3 223 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 ERVMER34-1Q9H9K5 563 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 IL21RQ9HBE5 538 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 NOX3Q9HBY0 568 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 BCL2L10Q9HD36 194 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 PRDM7Q9NQW5 492 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 PHF11Q9UIL8 331 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 SCP2D1Q9UJQ7 156 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 CES1P1Q9UKY3 287 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 OR6C74A6NCV1 312 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 C10orf142B7Z368 130 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 ZNF888P0CJ79 500 aaPredicted RBP11.45□□□□□ -0.58
HDAC4-208ENST00000463007 TMIGD3P0DMS9 266 aaPredicted RBP11.45□□□□□ -0.58
HDAC4-208ENST00000463007 F3P13726 295 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 CXCL2P19875 107 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 DECR1Q16698 335 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 LRRC37A5PQ49AS3 106 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 OR11G2Q8NGC1 345 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 FOXN4Q96NZ1 517 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 TSSK2Q96PF2 358 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 GABRG3Q99928 467 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 TMEM106CQ9BVX2 250 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 ACTRT3Q9BYD9 372 aa11.45□□□□□ -0.58
HDAC4-208ENST00000463007 MEIKINA0A087WXM9 373 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 A0A1B0GVI7 797 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 OR2W5A6NFC9 320 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 SELENOFO60613 162 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 STX11O75558 287 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 UBL3O95164 117 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 RRASP10301 218 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 NT5EP21589 574 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 PBX2P40425 430 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 ATXN7L3Q14CW9 347 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-208ENST00000463007 NDUFAF6Q330K2 333 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 TMEM35AQ53FP2 167 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 BEX5Q5H9J7 111 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 ZNF425Q6IV72 752 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 TMEM64Q6YI46 380 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 GID4Q8IVV7 300 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 OR5M1Q8NGP8 315 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 OR56B4Q8NH76 319 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 RPP25Q9BUL9 199 aaKnown RBP11.44□□□□□ -0.58
HDAC4-208ENST00000463007 LMAN2LQ9H0V9 348 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 FKBP7Q9Y680 259 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 LOC100509620A0A075B734 347 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 SLC31A1O15431 190 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 KCNJ13O60928 360 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 MAS1P04201 325 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 LIPCP11150 499 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 PRKACAP17612 351 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 RPS21P63220 83 aaKnown RBP11.44□□□□□ -0.58
HDAC4-208ENST00000463007 DEFA5Q01523 94 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 LINC00303Q3SY05 128 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 HEPHL1Q6MZM0 1159 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 SLC48A1Q6P1K1 146 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 PARM1Q6UWI2 310 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 BTN2A1Q7KYR7 527 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 ZAR1Q86SH2 424 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 COX18Q8N8Q8 333 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 OR52E1Q8NGJ3 308 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 ZDHHC1Q8WTX9 485 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 DVL3Q92997 716 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-208ENST00000463007 CDCA3Q99618 268 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-208ENST00000463007 KXD1Q9BQD3 176 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 MTIF3Q9H2K0 278 aaKnown RBP11.44□□□□□ -0.58
HDAC4-208ENST00000463007 KCNK15Q9H427 330 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 MCCC2Q9HCC0 563 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 HRASLSQ9HDD0 168 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 KLF15Q9UIH9 416 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 LINC01565O15544 149 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 CDC123O75794 336 aaPredicted RBP11.44□□□□□ -0.58
HDAC4-208ENST00000463007 CSN2P05814 226 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 LPLP06858 475 aa11.44□□□□□ -0.58
HDAC4-208ENST00000463007 SULT1A3P0DMM9 295 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms