RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 RNF113BQ8IZP6 322 aaKnown RBP10.8□□□□□ -0.68
PDZRN3-203ENST00000462146 UXS1Q8NBZ7 420 aa10.8□□□□□ -0.68
PDZRN3-203ENST00000462146 CNOT9Q92600 299 aaKnown RBP10.8□□□□□ -0.68
PDZRN3-203ENST00000462146 SEMA4CQ9C0C4 833 aa10.8□□□□□ -0.68
PDZRN3-203ENST00000462146 ACTR6Q9GZN1 396 aa10.8□□□□□ -0.68
PDZRN3-203ENST00000462146 NRIP3Q9NQ35 241 aa10.8□□□□□ -0.68
PDZRN3-203ENST00000462146 SDHAF2Q9NX18 166 aa10.8□□□□□ -0.68
PDZRN3-203ENST00000462146 DEC1Q9P2X7 70 aa10.8□□□□□ -0.68
PDZRN3-203ENST00000462146 TBX21Q9UL17 535 aa10.8□□□□□ -0.68
PDZRN3-203ENST00000462146 ZNF346Q9UL40 294 aaKnown RBP10.8□□□□□ -0.68
PDZRN3-203ENST00000462146 LRRC72A6NJI9 287 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 PRR32B1ATL7 298 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 CTDSPLO15194 276 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 SIX6O95475 246 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 EML2O95834 649 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 TGM6O95932 706 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 MAT2AP31153 395 aaKnown RBP10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 KIAA1024LP59773 190 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 HTR4Q13639 388 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 TUSC1Q2TAM9 212 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 AGBL4Q5VU57 503 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 ALKAL2Q6UX46 152 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 C3P1Q6ZMU1 363 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 PRSS41Q7RTY9 318 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 COX18Q8N8Q8 333 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 TMEM52Q8NDY8 209 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 OR4K14Q8NGD5 310 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 SNX33Q8WV41 574 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 SUSD6Q92537 303 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 OR1F2PQ96R84 312 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 B3GNT4Q9C0J1 378 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 NOX3Q9HBY0 568 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 C12orf4Q9NQ89 552 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 TRBV23OR9-2A0A075B6M9 112 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 PLSCR5A0PG75 271 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 FAM171A2A8MVW0 826 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 STX11O75558 287 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 ARL6IP5O75915 188 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 DBIP07108 87 aaKnown RBP10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 TMIGD3P0DMS9 266 aaPredicted RBP10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 NAGAP17050 411 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 SRMP19623 302 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 DPP4P27487 766 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 EMDP50402 254 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 GBX2P52951 348 aaPredicted RBP10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 UBE2MP61081 183 aaKnown RBP10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 ACTC1P68032 377 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 ACTA1P68133 377 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 PLA2G7Q13093 441 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 SLC35F2Q8IXU6 374 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 COQ8AQ8NI60 647 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 DMRTA2Q96SC8 542 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 TSPAN10Q9H1Z9 355 aaPredicted RBP10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 LIN7BQ9HAP6 207 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 NANSQ9NR45 359 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 NTMQ9P121 344 aa10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 MRPS2Q9Y399 296 aaKnown RBP10.79□□□□□ -0.68
PDZRN3-203ENST00000462146 MCIDASD6RGH6 385 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 C1QTNF3-AMACRE9PGA6 284 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 H3BSH0 61 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 L7N2F9 121 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 NUPL2O15504 423 aaKnown RBP10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 SERPINA3P01011 423 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 CT62P0C5K7 136 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 CMPK1P30085 196 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 PTH2RP49190 550 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 NANOS3P60323 173 aaKnown RBP10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 MELKQ14680 651 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 C2orf68Q2NKX9 166 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 GLDNQ6ZMI3 551 aaPredicted RBP10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 OVCH1Q7RTY7 1134 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 RGP1Q92546 391 aaPredicted RBP10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 SMARCD2Q92925 531 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 SIPA1Q96FS4 1042 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 RADILQ96JH8 1075 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 HDAC8Q9BY41 377 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 HAO2Q9NYQ3 351 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 MRPS23Q9Y3D9 190 aaKnown RBP10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 NUP210LQ5VU65 1888 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 A0A1B0GUH1 482 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 A0A1B0GVT2 93 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 A0A1B0GWA3 101 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 A0A1W2PP55 124 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 TCRBV16S1A1N1A0A5B0 115 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 MFSD2BA6NFX1 497 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 PPM1BO75688 479 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 SERPINI2O75830 405 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 KRT33AO76009 404 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 CEACAM5P06731 702 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 FCER2P06734 321 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 CPMP14384 443 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 ADH7P40394 386 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 PPP2CBP62714 309 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 PPP2CAP67775 309 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 FAM69AQ5T7M9 428 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 FHL5Q5TD97 284 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 METTL11BQ5VVY1 283 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 RPL13AP3Q6NVV1 102 aa10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 MRPL43Q8N983 215 aaKnown RBP10.78□□□□□ -0.68
PDZRN3-203ENST00000462146 DNAAF1Q8NEP3 725 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms