RNA–Protein interactions for RNA: ENST00000461118.5

COL9A2-205, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 1,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-205ENST00000461118 POTEKPQ9BYX7 375 aa16.33■□□□□ 0.2
COL9A2-205ENST00000461118 C12orf49Q9H741 205 aa16.33■□□□□ 0.2
COL9A2-205ENST00000461118 SAR1AQ9NR31 198 aa16.33■□□□□ 0.2
COL9A2-205ENST00000461118 KLHL14Q9P2G3 628 aa16.33■□□□□ 0.2
COL9A2-205ENST00000461118 ADAM21Q9UKJ8 722 aa16.33■□□□□ 0.2
COL9A2-205ENST00000461118 IGKV3D-15A0A087WSY6 115 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 FBP2O00757 339 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 ARHGEF9O43307 516 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 PPP3CBP16298 524 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 CCNA2P20248 432 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 CXCR1P25024 350 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 H3F3AP84243 136 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 RBBP4Q09028 425 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 ATRQ13535 2644 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 NFYCQ13952 458 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 COQ5Q5HYK3 327 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 SERPINA11Q86U17 422 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 PTOV1Q86YD1 416 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 HIPK4Q8NE63 616 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 Q96MF0 132 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 ZNF607Q96SK3 696 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 KLHL4Q9C0H6 718 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 OR10A4Q9H209 315 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 KAT8Q9H7Z6 458 aaKnown RBP16.32■□□□□ 0.2
COL9A2-205ENST00000461118 ZNF226Q9NYT6 803 aa16.32■□□□□ 0.2
COL9A2-205ENST00000461118 C6orf203Q9P0P8 240 aaPredicted RBP16.32■□□□□ 0.2
COL9A2-205ENST00000461118 CHD3Q12873 2000 aaKnown RBP16.31■□□□□ 0.2
COL9A2-205ENST00000461118 ANK3Q12955 4377 aaKnown RBP16.31■□□□□ 0.2
COL9A2-205ENST00000461118 PRORSD1PA6NEY8 169 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 EIF1BO60739 113 aaKnown RBP16.31■□□□□ 0.2
COL9A2-205ENST00000461118 SERPINB7O75635 380 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 NPPAP01160 153 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 IMPDH2P12268 514 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 PSMB1P20618 241 aaKnown RBP16.31■□□□□ 0.2
COL9A2-205ENST00000461118 PCSK6P29122 969 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 KLF10Q13118 480 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 PRSS57Q6UWY2 283 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 NET1Q7Z628 596 aaPredicted RBP16.31■□□□□ 0.2
COL9A2-205ENST00000461118 GABRG1Q8N1C3 465 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 CADM2Q8N3J6 435 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 C11orf65Q8NCR3 313 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 BHLHE22Q8NFJ8 381 aaPredicted RBP16.31■□□□□ 0.2
COL9A2-205ENST00000461118 C3orf49Q96BT1 292 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 MED18Q9BUE0 208 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 KLHL28Q9NXS3 571 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 GPR52Q9Y2T5 361 aa16.31■□□□□ 0.2
COL9A2-205ENST00000461118 ZC3H12DA2A288 527 aaKnown RBP16.3■□□□□ 0.2
COL9A2-205ENST00000461118 TRIM64A6NGJ6 449 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 TRIM64BA6NI03 449 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 ZNF716A6NP11 495 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 SMPD2O60906 423 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 GCM2O75603 506 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-205ENST00000461118 CRYGSP22914 178 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 LOXP28300 417 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-205ENST00000461118 OR3A2P47893 321 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 SLC16A1P53985 500 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 PCBP3P57721 371 aaKnown RBP16.3■□□□□ 0.2
COL9A2-205ENST00000461118 OR2B6P58173 313 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 MTPNP58546 118 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 SLC35A1P78382 337 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 CYLC2Q14093 348 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-205ENST00000461118 SELPLGQ14242 412 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 TRMT5Q32P41 509 aaKnown RBP16.3■□□□□ 0.2
COL9A2-205ENST00000461118 C22orf34Q6ZV56 151 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 GALNT5Q7Z7M9 940 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 P3H2Q8IVL5 708 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 LSMEM1Q8N8F7 131 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 PIGXQ8TBF5 258 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 ZNF300Q96RE9 604 aaPredicted RBP16.3■□□□□ 0.2
COL9A2-205ENST00000461118 HDHD5Q9BXW7 423 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 EVA1AQ9H8M9 152 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 EMC3Q9P0I2 261 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 ANGPT4Q9Y264 503 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 ROS1P08922 2347 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 MXRA5Q9NR99 2828 aa16.3■□□□□ 0.2
COL9A2-205ENST00000461118 BBIP1A8MTZ0 92 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 A8MVM7 634 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 ZNF814B7Z6K7 855 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 INAFM1C9JVW0 142 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 GPR171O14626 319 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 SLC22A2O15244 555 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 FRS3O43559 492 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 TPST1O60507 370 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 NPIPB7O75200 414 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 MFN2O95140 757 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 CNOT4O95628 575 aaKnown RBP16.29■□□□□ 0.2
COL9A2-205ENST00000461118 SF3A3Q12874 501 aaKnown RBP eCLIP16.29■□□□□ 0.2
COL9A2-205ENST00000461118 P2RY6Q15077 328 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 MAPRE2Q15555 327 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 CYP51A1Q16850 503 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 NANOGP8Q6NSW7 305 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 YTHDF3Q7Z739 585 aaKnown RBP16.29■□□□□ 0.2
COL9A2-205ENST00000461118 ATG4DQ86TL0 474 aaPredicted RBP16.29■□□□□ 0.2
COL9A2-205ENST00000461118 COMTD1Q86VU5 262 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 SLC30A8Q8IWU4 369 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 C10orf82Q8WW14 230 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 IGFBPL1Q8WX77 278 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 PIGTQ969N2 578 aa16.29■□□□□ 0.2
COL9A2-205ENST00000461118 NAA11Q9BSU3 229 aaPredicted RBP16.29■□□□□ 0.2
COL9A2-205ENST00000461118 NANOGQ9H9S0 305 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms