RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 KIAA1143Q96AT1 154 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF419Q96HQ0 510 aaPredicted RBP13.7□□□□□ -0.22
PTPRU-205ENST00000460170 FOXN4Q96NZ1 517 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 FN3KQ9H479 309 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF442Q9H7R0 627 aa13.7□□□□□ -0.22
PTPRU-205ENST00000460170 MEIS3P1A6NDR6 274 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 H7C2Y5 167 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 CTNSO60931 367 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 ALDOBP05062 364 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF16P17020 682 aaPredicted RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 RAB3AP20336 220 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 MRPL19P49406 292 aaKnown RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 RPS15P62841 145 aaKnown RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 ZP2Q05996 745 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 LTBQ06643 244 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 RSU1Q15404 277 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 SOWAHCQ53LP3 525 aaPredicted RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 VASNQ6EMK4 673 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 TSNAXQ99598 290 aaKnown RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 LYRM4Q9HD34 91 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 SPHK1Q9NYA1 384 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 UGT2A1Q9Y4X1 527 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 SULT2B1O00204 365 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 PIP5K1CO60331 668 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 IGFBP1P08833 259 aaPredicted RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 CTHP32929 405 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 BSGP35613 385 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 ADPRHP54922 357 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 NKG7Q16617 165 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 OR5M10Q6IEU7 315 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 NRIP3Q9NQ35 241 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 FBXO8Q9NRD0 319 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 NPAP1Q9NZP6 1156 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 OR51B4Q9Y5P0 310 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 TMEM269A0A1B0GVZ9 245 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 GJE1A6NN92 205 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 DLX5P56178 289 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 CFAP77Q6ZQR2 320 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 OR56B4Q8NH76 319 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 OR14L1PQ8NHC6 308 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 DYNC2LI1Q8TCX1 351 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 TM9SF4Q92544 642 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF578Q96N58 590 aaPredicted RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 C11orf54Q9H0W9 315 aaPredicted RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 RNF167Q9H6Y7 350 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 SLC23A2Q9UGH3 650 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 RPH3AQ9Y2J0 694 aaPredicted RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 LCMT2O60294 686 aaKnown RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 CRTAPO75718 401 aaPredicted RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 EPHA2P29317 976 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 SLC19A1P41440 591 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 CSNK2A1P68400 391 aaPredicted RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 OXA1LQ15070 435 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 TRMT12Q53H54 448 aaKnown RBP13.69□□□□□ -0.22
PTPRU-205ENST00000460170 UBE2NLQ5JXB2 153 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 TMEM240Q5SV17 173 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 ACSM5Q6NUN0 579 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 COMMD7Q86VX2 200 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 CSNK2A3Q8NEV1 391 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 OR5D14Q8NGL3 314 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 STACQ99469 402 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 ZNF160Q9HCG1 818 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 SLC6A20Q9NP91 592 aa13.69□□□□□ -0.22
PTPRU-205ENST00000460170 EFCAB7A8K855 629 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 OTX2P32243 289 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 ASTLQ6HA08 431 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-205ENST00000460170 DHRS4L2Q6PKH6 230 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 OR14A16Q8NHC5 309 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 LINC00615Q96LM1 132 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-205ENST00000460170 CDC6Q99741 560 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 WASH6PQ9NQA3 447 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 PARPBPQ9NWS1 579 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 NID1P14543 1247 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 CYCSP99999 105 aaKnown RBP13.68□□□□□ -0.22
PTPRU-205ENST00000460170 POU3F1Q03052 451 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-205ENST00000460170 MRPL49Q13405 166 aaKnown RBP13.68□□□□□ -0.22
PTPRU-205ENST00000460170 TSC22D1Q15714 1073 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 C11orf91Q3C1V1 193 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 HAGHLQ6PII5 290 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-205ENST00000460170 PARM1Q6UWI2 310 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 DPY19L2P2Q6ZN68 376 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 OR13H1Q8NG92 308 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 MFSD8Q8NHS3 518 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 SPTSSAQ969W0 71 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 C19orf53Q9UNZ5 99 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-205ENST00000460170 KDM4EB2RXH2 506 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-205ENST00000460170 F5H5K5 113 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 UBL3O95164 117 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 DIRAS3O95661 229 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 LYPD4Q6UWN0 246 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 APOOLQ6UXV4 268 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 FOXRED1Q96CU9 486 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-205ENST00000460170 SDF2Q99470 211 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 MAP3K3Q99759 626 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 SLC6A13Q9NSD5 602 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 MAKP20794 623 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 ITGB8P26012 769 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 CTGFP29279 349 aa13.68□□□□□ -0.22
PTPRU-205ENST00000460170 TRHRP34981 398 aaPredicted RBP13.68□□□□□ -0.22
PTPRU-205ENST00000460170 MALLQ13021 153 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms