RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 BCHEP06276 602 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 ITGA5P08648 1049 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 DSTNP60981 165 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 SLC17A1Q14916 467 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 SLC9B1Q4ZJI4 515 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 RNF220Q5VTB9 566 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 MAVSQ7Z434 540 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 C17orf78Q8N4C9 275 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 C1orf162Q8NEQ5 155 aaPredicted RBP20.04■□□□□ 0.8
PTPN4-207ENST00000460162 OR52N5Q8NH56 324 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 OR52P1PQ8NH57 321 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 MUS81Q96NY9 551 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 AMBRA1Q9C0C7 1298 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 ADAM19Q9H013 955 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 SLCO5A1Q9H2Y9 848 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 BARX1Q9HBU1 254 aaPredicted RBP20.04■□□□□ 0.8
PTPN4-207ENST00000460162 THUMPD1Q9NXG2 353 aaKnown RBP20.04■□□□□ 0.8
PTPN4-207ENST00000460162 DCTN4Q9UJW0 460 aa20.04■□□□□ 0.8
PTPN4-207ENST00000460162 CR1P17927 2039 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 ZC3H12DA2A288 527 aaKnown RBP20.03■□□□□ 0.8
PTPN4-207ENST00000460162 INAFM1C9JVW0 142 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 IGHV4-39P01824 125 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 GPIP06744 558 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 ETFAP13804 333 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 CRATP43155 626 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 MAGOHP61326 146 aaKnown RBP20.03■□□□□ 0.8
PTPN4-207ENST00000460162 GABRA6Q16445 453 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 ZSWIM7Q19AV6 140 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 C1QTNF12Q5T7M4 302 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 VRK2Q86Y07 508 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 PIAS4Q8N2W9 510 aaPredicted RBP20.03■□□□□ 0.8
PTPN4-207ENST00000460162 TMEM45BQ96B21 275 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 ITCHQ96J02 903 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 HS6ST2Q96MM7 605 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 TPT1P8Q9HAU6 139 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 RLIMQ9NVW2 624 aa20.03■□□□□ 0.8
PTPN4-207ENST00000460162 ZNF443Q9Y2A4 671 aaPredicted RBP20.03■□□□□ 0.8
PTPN4-207ENST00000460162 KLF11O14901 512 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 CD8AP01732 235 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 CXCR1P25024 350 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 COPZ1P61923 177 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 KRTAP1-1Q07627 177 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 NRF1Q16656 503 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 OTUD3Q5T2D3 398 aaPredicted RBP20.02■□□□□ 0.8
PTPN4-207ENST00000460162 AGAP6Q5VW22 663 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 WBP2NLQ6ICG8 309 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 OR52E4Q8NGH9 312 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 SLC38A5Q8WUX1 472 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 TLCD1Q96CP7 247 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 SF3B5Q9BWJ5 86 aaKnown RBP20.02■□□□□ 0.8
PTPN4-207ENST00000460162 CACYBPQ9HB71 228 aaKnown RBP20.02■□□□□ 0.8
PTPN4-207ENST00000460162 UPB1Q9UBR1 384 aa20.02■□□□□ 0.8
PTPN4-207ENST00000460162 DNHD1Q96M86 4753 aa20.02■□□□□ 0.79
PTPN4-207ENST00000460162 TMEM247A6NEH6 219 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 LIPT2A6NK58 231 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 RNF223E7ERA6 249 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 UBDO15205 165 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 TFPTP0C1Z6 253 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 GKN3PP0CG01 181 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 CD40P25942 277 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 ACVR1BP36896 505 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 ZNF83P51522 516 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 POLR2JP52435 117 aaKnown RBP20.01■□□□□ 0.79
PTPN4-207ENST00000460162 TGFBR3Q03167 851 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 LARS2Q15031 903 aaKnown RBP20.01■□□□□ 0.79
PTPN4-207ENST00000460162 GTDC1Q4AE62 458 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 C6orf10Q5SRN2 563 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 SLC22A25Q6T423 547 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 DNM1P46Q6ZS02 220 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 MIER2Q8N344 545 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 OR9I1Q8NGQ6 314 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 OR52B2Q96RD2 323 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 PIF1Q9H611 641 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 SLC7A10Q9NS82 523 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 POU2F3Q9UKI9 436 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 AMDHD2Q9Y303 409 aa20.01■□□□□ 0.79
PTPN4-207ENST00000460162 A0A096LPI6 279 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 AQP7P3A6NL99 342 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 ERLIN1O75477 346 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 ACAA2P42765 397 aaKnown RBP20■□□□□ 0.79
PTPN4-207ENST00000460162 FOXG1P55316 489 aaPredicted RBP20■□□□□ 0.79
PTPN4-207ENST00000460162 DMTNQ08495 405 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 SPOCK1Q08629 439 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 CEACAM7Q14002 265 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 OR7A5Q15622 319 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 TSPO2Q5TGU0 170 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 CADM2Q8N3J6 435 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 OR9K2Q8NGE7 335 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 AURKBQ96GD4 344 aaPredicted RBP20■□□□□ 0.79
PTPN4-207ENST00000460162 TMEM19Q96HH6 336 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 DHRS9Q9BPW9 319 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 REG4Q9BYZ8 158 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 ARMC7Q9H6L4 198 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 TMBIM4Q9HC24 238 aa20■□□□□ 0.79
PTPN4-207ENST00000460162 A0A0G2JPF8 293 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 A0A1W2PR80 420 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 FAM234BA2RU67 622 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 HNRNPCL2B2RXH8 293 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 HNRNPCL3B7ZW38 293 aa19.99■□□□□ 0.79
PTPN4-207ENST00000460162 M0R1B8 84 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms