RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 AQP2P41181 271 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 SLC6A8P48029 635 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 GIPRP48546 466 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 TMED10P49755 219 aaKnown RBP7.88□□□□□ -1.15
RIF1-208ENST00000457745 SMCPP49901 116 aaPredicted RBP7.88□□□□□ -1.15
RIF1-208ENST00000457745 ESRRGP62508 458 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 RPS4XP62701 263 aaKnown RBP7.88□□□□□ -1.15
RIF1-208ENST00000457745 PMP22Q01453 160 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 BLMHQ13867 455 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 ZSWIM7Q19AV6 140 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 SLC25A53Q5H9E4 307 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 RNFT1Q5M7Z0 435 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 SLC35F1Q5T1Q4 408 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 BROXQ5VW32 411 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 SLC22A10Q63ZE4 541 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 TMEM154Q6P9G4 183 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 B3GLCTQ6Y288 498 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 GRINAQ7Z429 371 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 PLCZ1Q86YW0 608 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 TCEANCQ8N8B7 351 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 BPIFB6Q8NFQ5 453 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 DNAJA4Q8WW22 397 aaPredicted RBP7.88□□□□□ -1.15
RIF1-208ENST00000457745 KIAA1143Q96AT1 154 aaPredicted RBP7.88□□□□□ -1.15
RIF1-208ENST00000457745 TMIGD2Q96BF3 282 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 MPP4Q96JB8 637 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 JSRP1Q96MG2 331 aaPredicted RBP7.88□□□□□ -1.15
RIF1-208ENST00000457745 HS6ST2Q96MM7 605 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 TMEM43Q9BTV4 400 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 ING2Q9H160 280 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 FN3KQ9H479 309 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 ZNF556Q9HAH1 456 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 HINT3Q9NQE9 182 aaKnown RBP7.88□□□□□ -1.15
RIF1-208ENST00000457745 KLHL1Q9NR64 748 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 TBC1D23Q9NUY8 699 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 IL20Q9NYY1 176 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 TVP23BQ9NYZ1 205 aa7.88□□□□□ -1.15
RIF1-208ENST00000457745 ZNF346Q9UL40 294 aaKnown RBP7.88□□□□□ -1.15
RIF1-208ENST00000457745 A0A1W2PNR3 127 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 MAGEA13PA6NCF6 341 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 FAM183AA6NL82 134 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 TP53I11O14683 189 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 SURF4O15260 269 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 KLK10O43240 276 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 ZNHIT1O43257 154 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 MT-ND2P03891 347 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 ITGB2P05107 769 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 TFAP2AP05549 437 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 TSPAN19P0C672 248 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 ASAH2BP0C7U1 165 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 CLUP10909 449 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 ICAM2P13598 275 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 ATP6V1B1P15313 513 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 UQCRC1P31930 480 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 CD79BP40259 229 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 EIF2S3P41091 472 aaKnown RBP7.87□□□□□ -1.15
RIF1-208ENST00000457745 MAP2K4P45985 399 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 SLC9A3P48764 834 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 P2RY4P51582 365 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 CCL11P51671 97 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 POLR2HP52434 150 aaKnown RBP7.87□□□□□ -1.15
RIF1-208ENST00000457745 SUMO3P55854 103 aaPredicted RBP7.87□□□□□ -1.15
RIF1-208ENST00000457745 CLDN15P56746 228 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 COPZ1P61923 177 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 PSPHP78330 225 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 OC90Q02509 493 aaPredicted RBP7.87□□□□□ -1.15
RIF1-208ENST00000457745 RPL18Q07020 188 aaKnown RBP7.87□□□□□ -1.15
RIF1-208ENST00000457745 IL18R1Q13478 541 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 OR1C1Q15619 314 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 LCE2AQ5TA79 106 aaPredicted RBP7.87□□□□□ -1.15
RIF1-208ENST00000457745 OTPQ5XKR4 325 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 TIGD3Q6B0B8 471 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 KRT80Q6KB66 452 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 JMJD6Q6NYC1 403 aaPredicted RBP7.87□□□□□ -1.15
RIF1-208ENST00000457745 PLXDC2Q6UX71 529 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 SHFQ7M4L6 423 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 YRDCQ86U90 279 aaKnown RBP7.87□□□□□ -1.15
RIF1-208ENST00000457745 MISPQ8IVT2 679 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 SULF2Q8IWU5 870 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 RNF113BQ8IZP6 322 aaKnown RBP7.87□□□□□ -1.15
RIF1-208ENST00000457745 GHDCQ8N2G8 530 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 KDM8Q8N371 416 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 CLDN22Q8N7P3 220 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 OR2M7Q8NG81 312 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 OR4K17Q8NGC6 315 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 KCNE4Q8WWG9 221 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 HDAC2Q92769 488 aaKnown RBP7.87□□□□□ -1.15
RIF1-208ENST00000457745 RASD2Q96D21 266 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 TMEM41AQ96HV5 264 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 SECISBP2Q96T21 854 aaKnown RBP7.87□□□□□ -1.15
RIF1-208ENST00000457745 DDOQ99489 341 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 TAPBPLQ9BX59 468 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 Q9H521 79 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 FKBP14Q9NWM8 211 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 TAS2R5Q9NYW4 299 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 LRFN1Q9P244 771 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 ORC6Q9Y5N6 252 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 LIPGQ9Y5X9 500 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 KCNMB2Q9Y691 235 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 CELSR3Q9NYQ7 3312 aa7.87□□□□□ -1.15
RIF1-208ENST00000457745 OR2M5A3KFT3 312 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms