RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 SLC16A1P53985 500 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 SLC35A1P78382 337 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 HOXC5Q00444 222 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 BEND4Q6ZU67 534 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 NUFIP2Q7Z417 695 aaKnown RBP15.41■□□□□ 0.06
USP39-208ENST00000455732 TRIM2Q9C040 744 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 MYLK2Q9H1R3 596 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 LIME1Q9H400 295 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 C12orf49Q9H741 205 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 KLHL28Q9NXS3 571 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 NDRG3Q9UGV2 375 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 SLC13A4Q9UKG4 626 aa15.41■□□□□ 0.06
USP39-208ENST00000455732 GMNCA6NCL1 334 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 ZNF716A6NP11 495 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 COX4I1P13073 169 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 HTR2AP28223 471 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 IDUAP35475 653 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 RGS8P57771 180 aaPredicted RBP15.4■□□□□ 0.06
USP39-208ENST00000455732 OR2B6P58173 313 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 ERICH5Q6P6B1 374 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 PAQR6Q6TCH4 344 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 CCDC80Q76M96 950 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 STK35Q8TDR2 534 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 DNAJA4Q8WW22 397 aaPredicted RBP15.4■□□□□ 0.06
USP39-208ENST00000455732 RCN3Q96D15 328 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 ARHGDIGQ99819 225 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 ECSITQ9BQ95 431 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 OR10A4Q9H209 315 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 EMC3Q9P0I2 261 aa15.4■□□□□ 0.06
USP39-208ENST00000455732 A0A1B0GWA3 101 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 LIPT2A6NK58 231 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 ZNF814B7Z6K7 855 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 M0QX08 132 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 FMO6PO60774 539 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 FZD7O75084 574 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 LGI1O95970 557 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 GPIP06744 558 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 PNMTP11086 282 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 PSMB1P20618 241 aaKnown RBP15.39■□□□□ 0.05
USP39-208ENST00000455732 OR3A2P47893 321 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 NCALDP61601 193 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 VEZF1Q14119 521 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 NRF1Q16656 503 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 EXOC3L2Q2M3D2 409 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 FAM91A1Q658Y4 838 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 SPNS3Q6ZMD2 512 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 STAC2Q6ZMT1 411 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 ARPINQ7Z6K5 226 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 GALNT5Q7Z7M9 940 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 TREML1Q86YW5 311 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 GABRG1Q8N1C3 465 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 POU5F2Q8N7G0 328 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 SMYD1Q8NB12 490 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 GPR32P1Q8NGA4 272 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 OR52E4Q8NGH9 312 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 RASSF5Q8WWW0 418 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 TAMM41Q96BW9 452 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 ZNF583Q96ND8 569 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 WFIKKN1Q96NZ8 548 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 ZNF300Q96RE9 604 aaPredicted RBP15.39■□□□□ 0.05
USP39-208ENST00000455732 FAM107BQ9H098 131 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 RPS6KB2Q9UBS0 482 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 AP3M1Q9Y2T2 418 aa15.39■□□□□ 0.05
USP39-208ENST00000455732 ROS1P08922 2347 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 A0A1W2PPR1 153 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 FAM220BPB1ANY3 271 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 GPR171O14626 319 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 OPN1SWP03999 348 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 HRGP04196 525 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 PPP3CBP16298 524 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 CD247P20963 164 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 FPR1P21462 350 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 CRYBA2P53672 197 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 IST1P53990 364 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 GYS2P54840 703 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 GNGT1P63211 74 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 BNIP2Q12982 314 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 DUSP7Q16829 419 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 SWT1Q5T5J6 900 aaKnown RBP15.38■□□□□ 0.05
USP39-208ENST00000455732 C1orf140Q5VVS0 124 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 ULK3Q6PHR2 472 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 C5orf46Q6UWT4 87 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 HACD2Q6Y1H2 254 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 CPLX4Q7Z7G2 160 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 RANBP3LQ86VV4 465 aaPredicted RBP15.38■□□□□ 0.05
USP39-208ENST00000455732 NINJ1Q92982 152 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 DNAJA3Q96EY1 480 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 NAA11Q9BSU3 229 aaPredicted RBP15.38■□□□□ 0.05
USP39-208ENST00000455732 PLEKHF2Q9H8W4 249 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 ST6GALNAC2Q9UJ37 374 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 GPR52Q9Y2T5 361 aa15.38■□□□□ 0.05
USP39-208ENST00000455732 A0A0B4J2E0 115 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 A0A1B0GX12 115 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 ELOA3DA6NLF2 546 aaPredicted RBP15.37■□□□□ 0.05
USP39-208ENST00000455732 TPST2O60704 377 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 RAMP1O60894 148 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 CNOT4O95628 575 aaKnown RBP15.37■□□□□ 0.05
USP39-208ENST00000455732 EGR4Q05215 589 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 CEACAM7Q14002 265 aa15.37■□□□□ 0.05
USP39-208ENST00000455732 ELOA3BQ3SY89 546 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms