RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 CSF2P04141 144 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 PLEKP08567 350 aaPredicted RBP3.69□□□□□ -1.82
LINC00393-202ENST00000452852 ANXA4P09525 319 aaPredicted RBP3.69□□□□□ -1.82
LINC00393-202ENST00000452852 CCDC172P0C7W6 258 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 GIFP27352 417 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 OTX2P32243 289 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 TRIM23P36406 574 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 FHITP49789 147 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 ERVPABLB-1P60509 514 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 RPL27P61353 136 aaKnown RBP3.69□□□□□ -1.82
LINC00393-202ENST00000452852 FZD2Q14332 565 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 ELOCQ15369 112 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 CDKN3Q16667 212 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 DEFB133Q30KQ1 61 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 KIAA1644Q3SXP7 199 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 C2CD6Q53TS8 623 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 TCHHL1Q5QJ38 904 aaPredicted RBP3.69□□□□□ -1.82
LINC00393-202ENST00000452852 STEAP1BQ6NZ63 245 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 SCYL2Q6P3W7 929 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 NIPAL3Q6P499 406 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 GUSBP11Q6P575 273 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 LRRC8BQ6P9F7 803 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 CBLN3Q6UW01 205 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 GDPD4Q6W3E5 623 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF730Q6ZMV8 503 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 DPY19L2P2Q6ZN68 376 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 GCNT7Q6ZNI0 430 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 ARCQ7LC44 396 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 STRADAQ7RTN6 431 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 GOLGA7Q7Z5G4 137 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 VPS36Q86VN1 386 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 LACC1Q8IV20 430 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF683Q8IZ20 524 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 ARL14Q8N4G2 192 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 MARVELD2Q8N4S9 558 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 ARFGAP2Q8N6H7 521 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 EIF1ADQ8N9N8 165 aaKnown RBP3.69□□□□□ -1.82
LINC00393-202ENST00000452852 TMEM178AQ8NBL3 297 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 OR2AP1Q8NGE2 309 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 OR6K2Q8NGY2 324 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 C8orf46Q8TAG6 207 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 FAM172AQ8WUF8 416 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 RXFP2Q8WXD0 754 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 TM9SF4Q92544 642 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 DYRK2Q92630 601 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 NT5C3BQ969T7 300 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 ISG20Q96AZ6 181 aaKnown RBP3.69□□□□□ -1.82
LINC00393-202ENST00000452852 LRR1Q96L50 414 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 BMFQ96LC9 184 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 VPS35Q96QK1 796 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 PSKH2Q96QS6 385 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 EPYCQ99645 322 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 C11orf70Q9BRQ4 267 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 PAPOLGQ9BWT3 736 aaKnown RBP3.69□□□□□ -1.82
LINC00393-202ENST00000452852 TDRD1Q9BXT4 1180 aaKnown RBP3.69□□□□□ -1.82
LINC00393-202ENST00000452852 GON7Q9BXV9 100 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 STRADBQ9C0K7 418 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 VCX2Q9H322 139 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 CLSTN2Q9H4D0 955 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 COG4Q9H9E3 785 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 RABL2AQ9UBK7 228 aaPredicted RBP3.69□□□□□ -1.82
LINC00393-202ENST00000452852 APOBEC3BQ9UH17 382 aaKnown RBP3.69□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF490Q9ULM2 529 aaPredicted RBP3.69□□□□□ -1.82
LINC00393-202ENST00000452852 SELENOKQ9Y6D0 94 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 CEP295Q9C0D2 2601 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 SCN8AQ9UQD0 1980 aa3.69□□□□□ -1.82
LINC00393-202ENST00000452852 IGF2RP11717 2491 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 URB1O60287 2271 aaKnown RBP3.68□□□□□ -1.82
LINC00393-202ENST00000452852 BOD1L1Q8NFC6 3051 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 A0A1W2PR80 420 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 TMEM110-MUSTN1A8MSY1 372 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 H0YL77 283 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 TMX2-CTNND1H3BSU7 103 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 CCSO14618 274 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 RAD51BO15315 384 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ZW10O43264 779 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ZMPSTE24O75844 475 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 STK17BO94768 372 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ANGPTL1O95841 491 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 PRB1P04280 392 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 CALB1P05937 261 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ALPIP09923 528 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 GSTT2P0CG29 244 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 GSTT2BP0CG30 244 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 C4BPBP20851 252 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 CYLC1P35663 651 aaPredicted RBP3.68□□□□□ -1.82
LINC00393-202ENST00000452852 AIF1P55008 147 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 TPI1P60174 286 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 RHOAP61586 193 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 EIF3IQ13347 325 aaKnown RBP3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ISXQ2M1V0 245 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 PARP15Q460N3 678 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 CCDC14Q49A88 953 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 KCTD21Q4G0X4 260 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ZNF311Q5JNZ3 666 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 SPATA46Q5T0L3 261 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 PPP1R2P3Q6NXS1 205 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 DNAJC24Q6P3W2 148 aa3.68□□□□□ -1.82
LINC00393-202ENST00000452852 ARHGAP11AQ6P4F7 1023 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms