RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 LOC100653049A0A140TA62 436 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 TMEM229AB2RXF0 380 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 M0QX08 132 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 KLF4O43474 513 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 SERPINB7O75635 380 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 KRT34O76011 436 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 AKR7A3O95154 331 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 GPIP06744 558 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 HTR2AP28223 471 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 IDUAP35475 653 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 GZMMP51124 257 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 ART1P52961 327 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 PCBP3P57721 371 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 ITGADQ13349 1161 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 CYLC2Q14093 348 aaPredicted RBP11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 OR7A5Q15622 319 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 PAQR6Q6TCH4 344 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 Q6ZT83 130 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 NET1Q7Z628 596 aaPredicted RBP11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 ARMC8Q8IUR7 673 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 TMEM99Q8N816 258 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 LSMEM1Q8N8F7 131 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 SMYD1Q8NB12 490 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 STEAP2Q8NFT2 490 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 OR10A6Q8NH74 314 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 C10orf82Q8WW14 230 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 S100PBPQ96BU1 408 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 LRRC58Q96CX6 371 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 HS3ST6Q96QI5 342 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 OR10A4Q9H209 315 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 PIF1Q9H611 641 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 MRGBPQ9NV56 204 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 EDARQ9UNE0 448 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 ANGPT4Q9Y264 503 aa11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 NOSIPQ9Y314 301 aaKnown RBP11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 HRNRQ86YZ3 2850 aaPredicted RBP11.28□□□□□ -0.6
PRPF40A-203ENST00000448428 PRORSD1PA6NEY8 169 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 GPR171O14626 319 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 TPST2O60704 377 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 NPIPB7O75200 414 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 IGHV3-9P01782 118 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 IL32P24001 234 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 DNASE1P24855 282 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 ADSLP30566 484 aaPredicted RBP11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 EGR4Q05215 589 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 SLC17A1Q14916 467 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 DUSP7Q16829 419 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 TRMT5Q32P41 509 aaKnown RBP11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 MMEL1Q495T6 779 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 RABL3Q5HYI8 236 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 OTUD3Q5T2D3 398 aaPredicted RBP11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 C1orf140Q5VVS0 124 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 REP15Q6BDI9 236 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 PAMR1Q6UXH9 720 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 SNX32Q86XE0 403 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 WFDC8Q8IUA0 241 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 BHLHE22Q8NFJ8 381 aaPredicted RBP11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 OR52E4Q8NGH9 312 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 STK35Q8TDR2 534 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 KISS1RQ969F8 398 aaPredicted RBP11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 TRIM2Q9C040 744 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 ADPRHL2Q9NX46 363 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 RPS6KB2Q9UBS0 482 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 FLVCR1Q9Y5Y0 555 aa11.27□□□□□ -0.61
PRPF40A-203ENST00000448428 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 A0A1B0GWA3 101 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 AQP7P3A6NL99 342 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 ELOA3DA6NLF2 546 aaPredicted RBP11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 FXYD1O00168 92 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 MRASO14807 208 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 MRPL33O75394 65 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 LYZL6O75951 148 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 ATE1O95260 518 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 CNOT4O95628 575 aaKnown RBP11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 LGI1O95970 557 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 NPPAP01160 153 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 OPN1SWP03999 348 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 RAF1P04049 648 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 IGHV1-2P23083 117 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 RGS8P57771 180 aaPredicted RBP11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 MAPRE2Q15555 327 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 TAB1Q15750 504 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 ELOA3BQ3SY89 546 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 COQ5Q5HYK3 327 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 FBXW9Q5XUX1 488 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 ALKBH2Q6NS38 261 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 C6orf89Q6UWU4 347 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 SPNS3Q6ZMD2 512 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 BHLHA15Q7RTS1 189 aaPredicted RBP11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 UBE2J2Q8N2K1 259 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 ZIC4Q8N9L1 334 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 ELOA3Q8NG57 546 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 DNAJA4Q8WW22 397 aaPredicted RBP11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 APH1AQ96BI3 265 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 FOXC2Q99958 501 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 SH3GL1Q99961 368 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 TAPBPLQ9BX59 468 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 C12orf10Q9HB07 376 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 ARMCX1Q9P291 453 aa11.26□□□□□ -0.61
PRPF40A-203ENST00000448428 SLC13A4Q9UKG4 626 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms