RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 NUDT18Q6ZVK8 323 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 ZAR1Q86SH2 424 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 COMMD7Q86VX2 200 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 IZUMO1Q8IYV9 350 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 UXS1Q8NBZ7 420 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 OR4K13Q8NH42 304 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 CTHRC1Q96CG8 243 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 MRPL48Q96GC5 212 aaKnown RBP17.54■□□□□ 0.4
SDCBP-204ENST00000447182 DERL3Q96Q80 235 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 METTL17Q9H7H0 456 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-204ENST00000447182 NPDC1Q9NQX5 325 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-204ENST00000447182 ANKRD10Q9NXR5 420 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 SPEF1Q9Y4P9 236 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 SYNDIG1LA6NDD5 238 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 TUBAL3A6NHL2 446 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 I3L521 148 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 AIPO00170 330 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 PDCD5O14737 125 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 TPD52L2O43399 206 aaKnown RBP17.54■□□□□ 0.4
SDCBP-204ENST00000447182 PLRG1O43660 514 aaKnown RBP17.54■□□□□ 0.4
SDCBP-204ENST00000447182 GUSBP08236 651 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 ADRB1P08588 477 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 RRASP10301 218 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 VSX2P58304 361 aaPredicted RBP17.54■□□□□ 0.4
SDCBP-204ENST00000447182 LGALS3BPQ08380 585 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 EXOSC7Q15024 291 aaKnown RBP17.54■□□□□ 0.4
SDCBP-204ENST00000447182 ALG10BQ5I7T1 473 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 MTFR2Q6P444 385 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 LINGO2Q7L985 606 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 ARSGQ96EG1 525 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 GFI1Q99684 422 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 TRPV4Q9HBA0 871 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 NCDNQ9UBB6 729 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 GNG8Q9UK08 70 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 RCE1Q9Y256 329 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 ENTPD2Q9Y5L3 495 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 FKBP7Q9Y680 259 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 SPACA6W5XKT8 324 aa17.54■□□□□ 0.4
SDCBP-204ENST00000447182 IFITM5A6NNB3 132 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 CYR61O00622 381 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 SULT1B1O43704 296 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 ADAM11O75078 769 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 DPP4P27487 766 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 NAA10P41227 235 aaPredicted RBP17.53■□□□□ 0.4
SDCBP-204ENST00000447182 DIO1P49895 249 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 CRYZQ08257 329 aaKnown RBP17.53■□□□□ 0.4
SDCBP-204ENST00000447182 ZNF776Q68DI1 518 aaPredicted RBP17.53■□□□□ 0.4
SDCBP-204ENST00000447182 FCRL6Q6DN72 434 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 TMEM52Q8NDY8 209 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 FAM131CQ96AQ9 280 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 SLC25A38Q96DW6 304 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 PTCHD1Q96NR3 888 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 PDCD1LG2Q9BQ51 273 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 NOX4Q9NPH5 578 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 DNAJB12Q9NXW2 375 aaKnown RBP17.53■□□□□ 0.4
SDCBP-204ENST00000447182 PCOLCE2Q9UKZ9 415 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 MAB21L2Q9Y586 359 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 ZNF860A6NHJ4 632 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 PIN1P1O15428 100 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 CT62P0C5K7 136 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 FCARP24071 287 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 BLVRAP53004 296 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 DHODHQ02127 395 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 PON3Q15166 354 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 AANATQ16613 207 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 ZSWIM7Q19AV6 140 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 SFRP4Q6FHJ7 346 aaPredicted RBP17.53■□□□□ 0.4
SDCBP-204ENST00000447182 FIGLAQ6QHK4 219 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 GLRX5Q86SX6 157 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 OR14C36Q8NHC7 312 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 SMAD5Q99717 465 aaKnown RBP17.53■□□□□ 0.4
SDCBP-204ENST00000447182 MRI1Q9BV20 369 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 BEX1Q9HBH7 125 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 NKIRAS2Q9NYR9 191 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 KLHL9Q9P2J3 617 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 FBXL3Q9UKT7 428 aa17.53■□□□□ 0.4
SDCBP-204ENST00000447182 COL4A2P08572 1712 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 CPN1P15169 458 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 RAB14P61106 215 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 MFSD13AQ14CX5 517 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 TMEM255AQ5JRV8 349 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 SLC35D3Q5M8T2 416 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 Q6ZTK2 550 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 SPRED2Q7Z698 418 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 OR6V1Q8N148 313 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 FTMTQ8N4E7 242 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 SPICQ8N5J4 248 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 OR52I2Q8NH67 350 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 CEP76Q8TAP6 659 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 RSC1A1Q92681 617 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 GSX2Q9BZM3 304 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 FLVCR2Q9UPI3 526 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 MRPS2Q9Y399 296 aaKnown RBP17.52■□□□□ 0.4
SDCBP-204ENST00000447182 IER3IP1Q9Y5U9 82 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 CHD7Q9P2D1 2997 aa17.52■□□□□ 0.4
SDCBP-204ENST00000447182 CIB4A0PJX0 185 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 M0R233 179 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 SNAPC5O75971 98 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 KRT33AO76009 404 aa17.51■□□□□ 0.39
SDCBP-204ENST00000447182 CFDP00746 253 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms