RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 UGT2B17O75795 530 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 KRT34O76011 436 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 NPPAP01160 153 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 IGHG1P01857 330 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 GSTM3P21266 225 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 CD9P21926 228 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 U2AF2P26368 475 aaKnown RBP eCLIP3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 ANXA13P27216 316 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 BCAP31P51572 246 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 TMEM50BP56557 158 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 SLC8A3P57103 927 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 KCNJ2P63252 427 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 PAX5Q02548 391 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 FASTKD3Q14CZ7 662 aaKnown RBP3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF77Q15935 545 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 MRPL23Q16540 153 aaKnown RBP3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 CYP51A1Q16850 503 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 MOGAT2Q3SYC2 334 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 VPS26BQ4G0F5 336 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 MS4A13Q5J8X5 152 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 LGSNQ5TDP6 509 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 LRRC31Q6UY01 552 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 LINC00523Q86TU6 105 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 RNF130Q86XS8 419 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 MFSD6LQ8IWD5 586 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 CCDC65Q8IXS2 484 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 CATSPER1Q8NEC5 780 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 OR4F6Q8NGB9 312 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 OR9A4Q8NGU2 314 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 ARNTL2Q8WYA1 636 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 FAF2Q96CS3 445 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 ATXN7L3BQ96GX2 97 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF641Q96N77 438 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 UPF3AQ9H1J1 476 aaKnown RBP3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 PPA2Q9H2U2 334 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 PARLQ9H300 379 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 INPP5EQ9NRR6 644 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNHIT6Q9NWK9 470 aaKnown RBP3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF446Q9NWS9 450 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 NUDT4Q9NZJ9 180 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 MLXQ9UH92 298 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 RARRES3Q9UL19 164 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 RHBDD3Q9Y3P4 386 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 USP16Q9Y5T5 823 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 SALL1Q9NSC2 1324 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 DENND4BO75064 1496 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 DISP1Q96F81 1524 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 ARHGEF12Q9NZN5 1544 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZCCHC11Q5TAX3 1644 aaKnown RBP3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 PREX1Q8TCU6 1659 aa3.58□□□□□ -1.84
HMGB1P48-201ENST00000446155 IGHV3OR16-10A0A075B7F0 116 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 PP2D1A8MPX8 630 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF879B4DU55 563 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 TRDCB7Z8K6 153 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 HIP1O00291 1037 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 EIF3HO15372 352 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 PSTPIP1O43586 416 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 CXCL13O43927 109 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 OR10H3O60404 316 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 IGHV3-9P01782 118 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 MMP1P03956 469 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 PLEKP08567 350 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 CT62P0C5K7 136 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF853P0CG23 659 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF24P17028 368 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF43P17038 809 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 SERPINA2P20848 420 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 IGFBP5P24593 272 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 STOMP27105 288 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 FGF9P31371 208 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 YWHABP31946 246 aaKnown RBP3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 OPRD1P41143 372 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 ETV5P41161 510 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 SRPXP78539 464 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 IRF8Q02556 426 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF154Q13106 437 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 PPIL2Q13356 520 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 IL18R1Q13478 541 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 DPYSL3Q14195 570 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 LPAL2Q16609 132 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 ISXQ2M1V0 245 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 TRIM16LQ309B1 348 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 HNRNPA1L2Q32P51 320 aaKnown RBP3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 TEX44Q53QW1 395 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 TWF2Q6IBS0 349 aaKnown RBP3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 FAM199XQ6PEV8 388 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 SASS6Q6UVJ0 657 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 METTL7BQ6UX53 244 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 HSDL2Q6YN16 418 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 MARCH9Q86YJ5 346 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 MTURNQ8N3F0 131 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 AQP11Q8NBQ7 271 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 ZNF485Q8NCK3 441 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 MARCH1Q8TCQ1 289 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 MITD1Q8WV92 249 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 TRUB1Q8WWH5 349 aaKnown RBP3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 CRYGNQ8WXF5 182 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 TOMM40LQ969M1 308 aa3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.57□□□□□ -1.84
HMGB1P48-201ENST00000446155 TMEM80Q96HE8 168 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms