RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 TP63Q9H3D4 680 aaPredicted RBP11.84□□□□□ -0.51
TIMP1-204ENST00000445623 S100A14Q9HCY8 104 aa11.84□□□□□ -0.51
TIMP1-204ENST00000445623 ALKBH4Q9NXW9 302 aa11.84□□□□□ -0.51
TIMP1-204ENST00000445623 TNFRSF10DQ9UBN6 386 aa11.84□□□□□ -0.51
TIMP1-204ENST00000445623 MCTS1Q9ULC4 181 aaKnown RBP11.84□□□□□ -0.51
TIMP1-204ENST00000445623 TRAPPC4Q9Y296 219 aa11.84□□□□□ -0.51
TIMP1-204ENST00000445623 TMEM5Q9Y2B1 443 aa11.84□□□□□ -0.51
TIMP1-204ENST00000445623 GTF3C1Q12789 2109 aa11.84□□□□□ -0.51
TIMP1-204ENST00000445623 MED12Q93074 2177 aa11.84□□□□□ -0.51
TIMP1-204ENST00000445623 A0A087WUU8 490 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 TRBV4-1A0A0J9YWV2 114 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 A0A1W2PNR3 127 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 ZC3H12DA2A288 527 aaKnown RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 KPNA4O00629 521 aaPredicted RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 EIF1BO60739 113 aaKnown RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 C1QL1O75973 258 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 CCNB2O95067 398 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 MT-ATP6P00846 226 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 SHC1P29353 583 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 DNAJA1P31689 397 aaKnown RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 RPS5P46782 204 aaKnown RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 HMGA2P52926 109 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 SUCLG1P53597 346 aaKnown RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 UGT2B15P54855 530 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 OR2B6P58173 313 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 RAC3P60763 192 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 EGR4Q05215 589 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 C19orf57Q0VDD7 668 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 C3AR1Q16581 482 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 CTU2Q2VPK5 515 aaKnown RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 PODNL1Q6PEZ8 512 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 Q6ZPB1 254 aaPredicted RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 FGD2Q7Z6J4 655 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 CHERPQ8IWX8 916 aaKnown RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 NRMQ8IXM6 262 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 OR5M9Q8NGP3 310 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 MFSD8Q8NHS3 518 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 PIGXQ8TBF5 258 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 OSTF1Q92882 214 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 KTI12Q96EK9 354 aaPredicted RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 SGTBQ96EQ0 304 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 NAA11Q9BSU3 229 aaPredicted RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 COQ10BQ9H8M1 238 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 PNPLA3Q9NST1 481 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 C6orf203Q9P0P8 240 aaPredicted RBP11.83□□□□□ -0.52
TIMP1-204ENST00000445623 ZNF835Q9Y2P0 537 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 ZGRF1Q86YA3 2104 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 ZFYVE26Q68DK2 2539 aa11.83□□□□□ -0.52
TIMP1-204ENST00000445623 SH3PXD2BA1X283 911 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 ENO4A6NNW6 628 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 H0YC42 278 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 CXCL13O43927 109 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 OR10H3O60404 316 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 FCGR2AP12318 317 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 IFI30P13284 250 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 PTNP21246 168 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 FPR1P21462 350 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 TPD52P55327 224 aaPredicted RBP11.82□□□□□ -0.52
TIMP1-204ENST00000445623 ELF3P78545 371 aaPredicted RBP11.82□□□□□ -0.52
TIMP1-204ENST00000445623 OR7A5Q15622 319 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 EXOC3L2Q2M3D2 409 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 PPP4R4Q6NUP7 873 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 MAMDC2Q7Z304 686 aaPredicted RBP11.82□□□□□ -0.52
TIMP1-204ENST00000445623 P4HA3Q7Z4N8 544 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 P3H2Q8IVL5 708 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 OR4K5Q8NGD3 323 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 PFN4Q8NHR9 129 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 LRTOMTQ8WZ04 291 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 TAAR8Q969N4 342 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 RELTQ969Z4 430 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 SLC25A36Q96CQ1 311 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 CENPNQ96H22 339 aaPredicted RBP11.82□□□□□ -0.52
TIMP1-204ENST00000445623 TUBA1CQ9BQE3 449 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 PTDSS2Q9BVG9 487 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 ASPNQ9BXN1 380 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 PRRG4Q9BZD6 226 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 FKRPQ9H9S5 495 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 NANSQ9NR45 359 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 ZNF175Q9Y473 711 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 CORINQ9Y5Q5 1042 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 U3KQV3 271 aa11.82□□□□□ -0.52
TIMP1-204ENST00000445623 KIAA1549Q9HCM3 1950 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 LIPT2A6NK58 231 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 SLC22A20A6NK97 555 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 CLCA1A8K7I4 914 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 H3BNX3 289 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 CH25HO95992 272 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 HIST1H2ABP04908 130 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 IMPDH2P12268 514 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 ENPP1P22413 925 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 ACVR2AP27037 513 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 LIMS1P48059 325 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 CTBP2P56545 445 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 PRKCDQ05655 676 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 PON3Q15166 354 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 TAF11Q15544 211 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 ZNF74Q16587 644 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 ZNF239Q16600 458 aaKnown RBP11.81□□□□□ -0.52
TIMP1-204ENST00000445623 MICAQ29983 383 aa11.81□□□□□ -0.52
TIMP1-204ENST00000445623 ACSF3Q4G176 576 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms