RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 CHRNEQ04844 493 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 BSPH1Q075Z2 132 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 DMTNQ08495 405 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 BST1Q10588 318 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 RAB35Q15286 201 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 NDUFAF6Q330K2 333 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 PRAMEF8Q5VWM4 474 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 PRAMEF7Q5VXH5 474 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 TMEM225Q6GV28 225 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 ABLIM2Q6H8Q1 611 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 WBP2NLQ6ICG8 309 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 ZNF544Q6NX49 715 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 PAQR6Q6TCH4 344 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 C5orf46Q6UWT4 87 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 FRRS1Q6ZNA5 592 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 RNF130Q86XS8 419 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 BHLHE22Q8NFJ8 381 aaPredicted RBP6.87□□□□□ -1.31
CD44-211ENST00000442151 RAB8BQ92930 207 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 MUS81Q96NY9 551 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 MANSC1Q9H8J5 431 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 CBLN4Q9NTU7 201 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 PNPOQ9NVS9 261 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 SELENONQ9NZV5 590 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 PRSS50Q9UI38 385 aa6.87□□□□□ -1.31
CD44-211ENST00000442151 GOLGA8QA0A0J9YX86 632 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 GOLGA8OA6NCC3 632 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 DPRXA6NFQ7 191 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 A8MVM7 634 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 C5orf58C9J3I9 102 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 GOLGA8NF8WBI6 632 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 HMGN4O00479 90 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 DANCRP0C864 163 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 GTF2E2P29084 291 aaKnown RBP6.86□□□□□ -1.31
CD44-211ENST00000442151 TACR3P29371 465 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 MPGP29372 298 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 ARRB2P32121 409 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 FABP6P51161 128 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 CASP9P55211 416 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 DSTNP60981 165 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 FAPQ12884 760 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 TNK1Q13470 666 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 DOC2BQ14184 412 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 MAPK14Q16539 360 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 TNFAIP8L3Q5GJ75 292 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 SLC22A25Q6T423 547 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 CLEC2AQ6UVW9 174 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 CASP12Q6UXS9 341 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 AAED1Q7RTV5 226 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 NET1Q7Z628 596 aaPredicted RBP6.86□□□□□ -1.31
CD44-211ENST00000442151 DTX2Q86UW9 622 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 SNX32Q86XE0 403 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 ANKRD42Q8N9B4 389 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 OR52P1PQ8NH57 321 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 ZNF75CPQ92670 426 aaPredicted RBP6.86□□□□□ -1.31
CD44-211ENST00000442151 TMEM45BQ96B21 275 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 ZNF300Q96RE9 604 aaPredicted RBP6.86□□□□□ -1.31
CD44-211ENST00000442151 SORT1Q99523 831 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 TRAF4Q9BUZ4 470 aaPredicted RBP6.86□□□□□ -1.31
CD44-211ENST00000442151 SPATA5L1Q9BVQ7 753 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 SPATA9Q9BWV2 254 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 REG4Q9BYZ8 158 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 TRIM2Q9C040 744 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 TMEM45AQ9NWC5 275 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 RPS6KB2Q9UBS0 482 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 RASD1Q9Y272 281 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 GPR45Q9Y5Y3 372 aa6.86□□□□□ -1.31
CD44-211ENST00000442151 C9JVG2 144 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 SDHDO14521 159 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 ABCD4O14678 606 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 UBDO15205 165 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 AKAP8O43823 692 aaKnown RBP6.85□□□□□ -1.31
CD44-211ENST00000442151 OR2T1O43869 369 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 ZNF500O60304 480 aaPredicted RBP6.85□□□□□ -1.31
CD44-211ENST00000442151 ENTPD5O75356 428 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 TGDSO95455 350 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 ERCC1P07992 297 aaPredicted RBP6.85□□□□□ -1.31
CD44-211ENST00000442151 CRATP43155 626 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 UBE2NP61088 152 aaKnown RBP6.85□□□□□ -1.31
CD44-211ENST00000442151 UFM1P61960 85 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 H3F3AP84243 136 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 EPS8Q12929 822 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 FADDQ13158 208 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 MFSD13AQ14CX5 517 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 C3orf36Q3SXR2 165 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 C22orf34Q6ZV56 151 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 KRT73Q86Y46 540 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 CCDC36Q8IYA8 594 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 CLEC4FQ8N1N0 589 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 MIER2Q8N344 545 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 STK35Q8TDR2 534 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 ADAM19Q9H013 955 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 SLC38A1Q9H2H9 487 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 SERHL2Q9H4I8 314 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 C12orf10Q9HB07 376 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 MYOZ1Q9NP98 299 aaPredicted RBP6.85□□□□□ -1.31
CD44-211ENST00000442151 MALT1Q9UDY8 824 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 KCNE5Q9UJ90 142 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 OSGIN1Q9UJX0 560 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 SLC13A4Q9UKG4 626 aa6.85□□□□□ -1.31
CD44-211ENST00000442151 CORO2BQ9UQ03 480 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms