RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 HMGA2P52926 109 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 CEBPGP53567 150 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR2B6P58173 313 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 MLF1P58340 268 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 C5orf64Q2M2E5 130 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 C18orf21Q32NC0 220 aaPredicted RBP3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 FAM106AQ4KMX7 169 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 STEAP1BQ6NZ63 245 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 CLEC18BQ6UXF7 455 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 ASCL4Q6XD76 172 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 PLEKHG7Q6ZR37 379 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 Q6ZVQ6 151 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 CENPUQ71F23 418 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 Q71RC1 249 aaPredicted RBP3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 ERICH1Q86X53 443 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 TMEM123Q8N131 208 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 NFAM1Q8NET5 270 aaPredicted RBP3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR51L1Q8NGJ5 315 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR6Q1Q8NGQ2 317 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR13C9Q8NGT0 318 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 RDH11Q8TC12 318 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 SETD7Q8WTS6 366 aaKnown RBP3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 FCAMRQ8WWV6 532 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 ST8SIA1Q92185 356 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 ASB9Q96DX5 294 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 TM4SF19Q96DZ7 209 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 FBXO17Q96EF6 278 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 PPP1R16AQ96I34 528 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 CPB2Q96IY4 423 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 C2orf48Q96LS8 159 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 C9orf72Q96LT7 481 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 DCTN5Q9BTE1 182 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 TRIM9Q9C026 710 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 LPAR2Q9HBW0 351 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 SGK2Q9HBY8 427 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 LYRM4Q9HD34 91 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 ADAP2Q9NPF8 381 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 UFSP2Q9NUQ7 469 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 ADA2Q9NZK5 511 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 UVRAGQ9P2Y5 699 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 RNF14Q9UBS8 474 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 ACOT9Q9Y305 439 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 OR10H1Q9Y4A9 318 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 LRP12Q9Y561 859 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 UACAQ9BZF9 1416 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF521Q96K83 1311 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 NEURL4Q96JN8 1562 aa3.54□□□□□ -1.84
CDC42BPA-207ENST00000441725 FAM240BA0A1B0GVZ2 78 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 H7C0C1 242 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC1A7O00341 560 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 TM9SF1O15321 606 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 KIAA0513O60268 411 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 FGF19O95750 216 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 CALB1P05937 261 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 FAM157CP0CG43 387 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF44P15621 663 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 GSTM3P21266 225 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 AADACP22760 399 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 DCTP40126 519 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 SOX3P41225 446 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 MATKP42679 507 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC1A2P43004 574 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLCO1A2P46721 670 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 HTR5AP47898 357 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 PPT1P50897 306 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 PSME3P61289 254 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 RPL27P61353 136 aaKnown RBP3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 HERVK_113P63132 956 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 ERVK-8P63133 956 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 MRPS25P82663 173 aaKnown RBP3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 CDK16Q00536 496 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 PJVKQ0ZLH3 352 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 CDH17Q12864 832 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 CYTH1Q15438 398 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 SLC15A2Q16348 729 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 MRPL23Q16540 153 aaKnown RBP3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 CDKN3Q16667 212 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 EXOC3L4Q17RC7 722 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 WHAMMP3Q1A5X7 153 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 TEX30Q5JUR7 227 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 C11orf87Q6NUJ2 197 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 RNASEKQ6P5S7 137 aaKnown RBP3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 PGAP1Q75T13 922 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 ASRGL1Q7L266 308 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 NUDCD3Q8IVD9 361 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 BBS7Q8IWZ6 715 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 BOD1L2Q8IYS8 172 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 ENTHD1Q8IYW4 607 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 PQLC3Q8N755 202 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 STXBP6Q8NFX7 210 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 SPPL2AQ8TCT8 520 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 MARC2Q969Z3 335 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 CMTM5Q96DZ9 223 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF354BQ96LW1 612 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 ERVK-6Q9BXR3 956 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 SIX2Q9NPC8 291 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 TXLNGQ9NUQ3 528 aa3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 EIF3KQ9UBQ5 218 aaKnown RBP3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 ZNF346Q9UL40 294 aaKnown RBP3.53□□□□□ -1.84
CDC42BPA-207ENST00000441725 LRPPRCP42704 1394 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms