RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 ELSPBP1Q96BH3 223 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 TAMM41Q96BW9 452 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 TM4SF18Q96CE8 201 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 ERLEC1Q96DZ1 483 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 C12orf66Q96MD2 445 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 PRAP1Q96NZ9 151 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF300Q96RE9 604 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 F2RL3Q96RI0 385 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 KXD1Q9BQD3 176 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 TIMM29Q9BSF4 260 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 NAA11Q9BSU3 229 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 TRMT61BQ9BVS5 477 aaKnown RBP3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 ACAT2Q9BWD1 397 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 RAB11FIP5Q9BXF6 653 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 MS4A8Q9BY19 250 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 SLC17A9Q9BYT1 436 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 CCDC90BQ9GZT6 254 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 NAA50Q9GZZ1 169 aaKnown RBP3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 LHPPQ9H008 270 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 OSGEPL1Q9H4B0 414 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 DUSP21Q9H596 190 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 MVB12BQ9H7P6 319 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 GPN2Q9H9Y4 310 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 CCNB1IP1Q9NPC3 277 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZDHHC4Q9NPG8 344 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 EXD2Q9NVH0 621 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 TAAR2Q9P1P5 351 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 ERVK-18Q9QC07 812 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 CRNNQ9UBG3 495 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 WARS2Q9UGM6 360 aaKnown RBP3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 MOSPD1Q9UJG1 213 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 OSGIN1Q9UJX0 560 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 PSME2Q9UL46 239 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 PPIEQ9UNP9 301 aaKnown RBP3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 FAM96BQ9Y3D0 163 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 PAM16Q9Y3D7 125 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 NAALAD2Q9Y3Q0 740 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 FAM32AQ9Y421 112 aaKnown RBP3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 CMAHPQ9Y471 501 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 PCYT1BQ9Y5K3 369 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 HELZP42694 1942 aaKnown RBP3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 PLXNB3Q9ULL4 1909 aa3.15□□□□□ -1.91
HMGB3P11-201ENST00000440127 PLXNA2O75051 1894 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 LOC100509620A0A075B734 347 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A1B0GVG6 124 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 A0A1W2PPW3 197 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 FEZF1A0PJY2 475 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PDZK1P1A8MUH7 402 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 E9PQ18 207 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 K7EQS6 105 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 CACNB4O00305 520 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 RTCAO00442 366 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PLPP1O14494 284 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 NDUFS4O43181 175 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PLRG1O43660 514 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 XPNPEP2O43895 674 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 LCMT2O60294 686 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 BCAS1O75363 584 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PDE9AO76083 593 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 CCNB2O95067 398 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 GOSR1O95249 250 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 TBX6O95947 436 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 BCL10O95999 233 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 IFNW1P05000 195 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SERPIND1P05546 499 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 HTR1AP08908 422 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 HOXC4P09017 264 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 TFPTP0C1Z6 253 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 MMP9P14780 707 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZNF182P17025 639 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMEM11P17152 192 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SRD5A1P18405 259 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 AGAP20933 346 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PCMT1P22061 227 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 GNLYP22749 145 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 C21orf33P30042 268 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 CMPK1P30085 196 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 PKLRP30613 574 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 GGT2P36268 569 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 FRKP42685 505 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 OR1E2P47887 323 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 CCT3P49368 545 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 COMPP49747 757 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 RAB28P51157 221 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ARFIP1P53367 373 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 CRYBA2P53672 197 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 CASP9P55211 416 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 CSNK1G2P78368 415 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SPIBQ01892 262 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 EMX1Q04741 257 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 EEF1A2Q05639 463 aaKnown RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 MAD2L1BPQ15013 274 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SHHQ15465 462 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 ZIC1Q15915 447 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 MICAQ29983 383 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 EXOC3L2Q2M3D2 409 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 TMEM35AQ53FP2 167 aa3.14□□□□□ -1.91
HMGB3P11-201ENST00000440127 SYT6Q5T7P8 510 aaPredicted RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms