RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 JKAMPQ9P055 326 aa17.38■□□□□ 0.37
SEMA3B-206ENST00000439487 TRAPPC4Q9Y296 219 aa17.38■□□□□ 0.37
SEMA3B-206ENST00000439487 SLC9A8Q9Y2E8 581 aa17.38■□□□□ 0.37
SEMA3B-206ENST00000439487 SS18L1O75177 396 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 SMNDC1O75940 238 aaKnown RBP eCLIP17.37■□□□□ 0.377e-6■■□□□ 11.4
SEMA3B-206ENST00000439487 PRKD3O94806 890 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 TCN1P20061 433 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 FPR1P21462 350 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 CALB2P22676 271 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 IDUAP35475 653 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 OR1E2P47887 323 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 ASCL1P50553 236 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 CDH12P55289 794 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 SELENOWP63302 87 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 CEACAM7Q14002 265 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 RNPS1Q15287 305 aaKnown RBP17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 C1orf140Q5VVS0 124 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 GLYATQ6IB77 296 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 FAM214BQ7L5A3 538 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 TSPYL5Q86VY4 417 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 TUSC5Q8IXB3 177 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 RBM15BQ8NDT2 890 aaKnown RBP17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 STK35Q8TDR2 534 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 SLC38A4Q969I6 547 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 FAM162AQ96A26 154 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 ZHX1-C8orf76Q96EF9 292 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 PIGMQ9H3S5 423 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 GLRX2Q9NS18 164 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 ADPRHL2Q9NX46 363 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 CD300AQ9UGN4 299 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 EMC9Q9Y3B6 208 aa17.37■□□□□ 0.37
SEMA3B-206ENST00000439487 ZNF814B7Z6K7 855 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 CYTIPO60759 359 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 NPIPB7O75200 414 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 ZNF682O95780 498 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 SERPINA1P01009 418 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 PNMTP11086 282 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 MSX2P35548 267 aaPredicted RBP17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 SLC35A1P78382 337 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 EGR4Q05215 589 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 RASGEF1BQ0VAM2 473 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 OR7A5Q15622 319 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 SAMD4BQ5PRF9 694 aaKnown RBP17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 ZNF613Q6PF04 617 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 CBLL1Q75N03 491 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 VTCN1Q7Z7D3 282 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 P3H2Q8IVL5 708 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 SLC43A2Q8N370 569 aa17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 KTI12Q96EK9 354 aaPredicted RBP17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 OPN3Q9H1Y3 402 aaPredicted RBP17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 ING1Q9UK53 422 aaPredicted RBP17.36■□□□□ 0.37
SEMA3B-206ENST00000439487 ALPK2Q86TB3 2170 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 ANKHD1Q8IWZ3 2542 aaKnown RBP17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 IGKV1D-42A0A075B6H8 117 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 A0A087WUJ7 227 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 LIPT2A6NK58 231 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 DNPH1O43598 174 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 UBOX5O94941 541 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 LYPD3O95274 346 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 CGAP01215 116 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 THY1P04216 161 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 HSD17B1P14061 328 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 PTNP21246 168 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 AGTR1P30556 359 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 UQCRC1P31930 480 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 RPS5P46782 204 aaKnown RBP17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 ZNF787Q6DD87 383 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 DEF8Q6ZN54 512 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 CCDC103Q8IW40 242 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 OR6K3Q8NGY3 331 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 ADAMTS16Q8TE57 1224 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 LZICQ8WZA0 190 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 RNASE6Q93091 150 aaKnown RBP17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 ZNF775Q96BV0 537 aaPredicted RBP17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 PSD2Q9BQI7 771 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 TAPBPLQ9BX59 468 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 PCDHAC1Q9H158 963 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 KLHL13Q9P2N7 655 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 PROCRQ9UNN8 238 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 CELSR2Q9HCU4 2923 aa17.35■□□□□ 0.37
SEMA3B-206ENST00000439487 TRAPPC13A5PLN9 417 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 A8MXE2 369 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 RAMP1O60894 148 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 AHSA1O95433 338 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 GPIP06744 558 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 YES1P07947 543 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 SNTB1Q13884 538 aaKnown RBP17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 FBXL19-AS1Q494R0 122 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 TMEM201Q5SNT2 666 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 ABLIM2Q6H8Q1 611 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 MEX3BQ6ZN04 569 aaKnown RBP17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 NUFIP2Q7Z417 695 aaKnown RBP17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 TMEM99Q8N816 258 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 ZNF610Q8N9Z0 462 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 SLC25A36Q96CQ1 311 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 ZNF300Q96RE9 604 aaPredicted RBP17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 NAA11Q9BSU3 229 aaPredicted RBP17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 PTDSS2Q9BVG9 487 aa17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 RBM24Q9BX46 236 aaKnown RBP17.34■□□□□ 0.37
SEMA3B-206ENST00000439487 C12orf49Q9H741 205 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms