RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 ARHGDIGQ99819 225 aa11.78□□□□□ -0.52
LINC00399-201ENST00000439008 PTDSS2Q9BVG9 487 aa11.78□□□□□ -0.52
LINC00399-201ENST00000439008 GLRX2Q9NS18 164 aa11.78□□□□□ -0.52
LINC00399-201ENST00000439008 KLHL28Q9NXS3 571 aa11.78□□□□□ -0.52
LINC00399-201ENST00000439008 FAM53CQ9NYF3 392 aa11.78□□□□□ -0.52
LINC00399-201ENST00000439008 PRSS50Q9UI38 385 aa11.78□□□□□ -0.52
LINC00399-201ENST00000439008 TRAPPC4Q9Y296 219 aa11.78□□□□□ -0.52
LINC00399-201ENST00000439008 TESMINQ9Y4I5 508 aa11.78□□□□□ -0.52
LINC00399-201ENST00000439008 IGKV3D-15A0A087WSY6 115 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 A6NNC1 897 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 FTCDNL1E5RQL4 147 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 NME4O00746 187 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 CCDC22O60826 627 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 POU2F1P14859 743 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 TNFRSF1BP20333 461 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 PCYT1AP49585 367 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 FOXG1P55316 489 aaPredicted RBP11.77□□□□□ -0.53
LINC00399-201ENST00000439008 COPZ1P61923 177 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 CSNK2A1P68400 391 aaPredicted RBP11.77□□□□□ -0.53
LINC00399-201ENST00000439008 OR1Q1Q15612 314 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 C6orf89Q6UWU4 347 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 GABRG1Q8N1C3 465 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 TMEM99Q8N816 258 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 ZIC4Q8N9L1 334 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 OR6T1Q8NGN1 323 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 DDIT4LQ96D03 193 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 KTI12Q96EK9 354 aaPredicted RBP11.77□□□□□ -0.53
LINC00399-201ENST00000439008 REXO5Q96IC2 774 aaKnown RBP11.77□□□□□ -0.53
LINC00399-201ENST00000439008 ECSITQ9BQ95 431 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 SPATA5L1Q9BVQ7 753 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 POTEKPQ9BYX7 375 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 KLHL4Q9C0H6 718 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 GP6Q9HCN6 339 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 RASSF1Q9NS23 344 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 MRGBPQ9NV56 204 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 SEC14L4Q9UDX3 406 aa11.77□□□□□ -0.53
LINC00399-201ENST00000439008 SPIN1Q9Y657 262 aaPredicted RBP11.77□□□□□ -0.53
LINC00399-201ENST00000439008 CADP27708 2225 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 A0A0B4J2E0 115 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 A0A1B0GX12 115 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 PRORSD1PA6NEY8 169 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 ZNF724A8MTY0 619 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 A8MVM7 634 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 SERPINB7O75635 380 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 AKR7A3O95154 331 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 UQCRBP14927 111 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 LOXP28300 417 aaPredicted RBP11.76□□□□□ -0.53
LINC00399-201ENST00000439008 OR3A2P47893 321 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 SLC16A1P53985 500 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 RGS8P57771 180 aaPredicted RBP11.76□□□□□ -0.53
LINC00399-201ENST00000439008 LTBQ06643 244 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 POU4F3Q15319 338 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 OR7A5Q15622 319 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 TMEM201Q5SNT2 666 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 C1orf140Q5VVS0 124 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 GTF2IRD2BQ6EKJ0 949 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 WDR88Q6ZMY6 472 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 CPLX4Q7Z7G2 160 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 GTF2IRD2Q86UP8 949 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 CXorf67Q86X51 503 aaPredicted RBP11.76□□□□□ -0.53
LINC00399-201ENST00000439008 PCYOX1LQ8NBM8 494 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 OR52E4Q8NGH9 312 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 SLC38A4Q969I6 547 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 TAAR8Q969N4 342 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 LRRC46Q96FV0 321 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 ARMC7Q9H6L4 198 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 CACYBPQ9HB71 228 aaKnown RBP11.76□□□□□ -0.53
LINC00399-201ENST00000439008 GID8Q9NWU2 228 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 ELOVL5Q9NYP7 299 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 KLHL9Q9P2J3 617 aa11.76□□□□□ -0.53
LINC00399-201ENST00000439008 DEFB108AA8MXU0 73 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 C16orf97H3BN30 126 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 DNPH1O43598 174 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 FZD7O75084 574 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 IGHV3-9P01782 118 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 HRGP04196 525 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 FUT4P22083 530 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 FKBP2P26885 142 aaKnown RBP11.75□□□□□ -0.53
LINC00399-201ENST00000439008 IDUAP35475 653 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 RPS5P46782 204 aaKnown RBP11.75□□□□□ -0.53
LINC00399-201ENST00000439008 MAP2K6P52564 334 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 CDH12P55289 794 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 SLC35A1P78382 337 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 SLC17A1Q14916 467 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 PDK3Q15120 406 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 PAQR6Q6TCH4 344 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 PATL1Q86TB9 770 aaKnown RBP11.75□□□□□ -0.53
LINC00399-201ENST00000439008 TMEM200AQ86VY9 491 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 VANGL1Q8TAA9 524 aaPredicted RBP11.75□□□□□ -0.53
LINC00399-201ENST00000439008 DACH2Q96NX9 599 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 MCHR1Q99705 422 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 TRIM2Q9C040 744 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 C6orf203Q9P0P8 240 aaPredicted RBP11.75□□□□□ -0.53
LINC00399-201ENST00000439008 TESQ9UGI8 421 aaKnown RBP11.75□□□□□ -0.53
LINC00399-201ENST00000439008 PRDM4Q9UKN5 801 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 FLVCR1Q9Y5Y0 555 aa11.75□□□□□ -0.53
LINC00399-201ENST00000439008 HIVEP1P15822 2718 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 A0A087WUJ7 227 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 AQP7P3A6NL99 342 aa11.74□□□□□ -0.53
LINC00399-201ENST00000439008 FAM220BPB1ANY3 271 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms