RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 ERP27Q96DN0 273 aa9.19□□□□□ -0.94
RTN4-211ENST00000438462 ALKBH3Q96Q83 286 aaPredicted RBP9.19□□□□□ -0.94
RTN4-211ENST00000438462 PRR25Q96S07 402 aa9.19□□□□□ -0.94
RTN4-211ENST00000438462 PCGF1Q9BSM1 259 aa9.19□□□□□ -0.94
RTN4-211ENST00000438462 SSBP3Q9BWW4 388 aaPredicted RBP9.19□□□□□ -0.94
RTN4-211ENST00000438462 HSD3B7Q9H2F3 369 aa9.19□□□□□ -0.94
RTN4-211ENST00000438462 EXD2Q9NVH0 621 aa9.19□□□□□ -0.94
RTN4-211ENST00000438462 DCAF16Q9NXF7 216 aa9.19□□□□□ -0.94
RTN4-211ENST00000438462 LRCH1Q9Y2L9 728 aa9.19□□□□□ -0.94
RTN4-211ENST00000438462 FLVCR1Q9Y5Y0 555 aa9.19□□□□□ -0.94
RTN4-211ENST00000438462 DSPPQ9NZW4 1301 aa9.19□□□□□ -0.94
RTN4-211ENST00000438462 CENPVL1A0A0U1RR11 272 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 CENPVL3A0A0U1RRI6 287 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 MYO1GB0I1T2 1018 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 UBOX5O94941 541 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 CLPTM1O96005 669 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 OPN1SWP03999 348 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 BCKDHAP12694 445 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 ARR3P36575 388 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 KIR2DS4P43632 304 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 PTDSS1P48651 473 aaKnown RBP9.18□□□□□ -0.94
RTN4-211ENST00000438462 ZNF117Q03924 483 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 TSNQ15631 228 aaKnown RBP9.18□□□□□ -0.94
RTN4-211ENST00000438462 FXNQ16595 210 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 C6orf89Q6UWU4 347 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 TMPPEQ6ZT21 453 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 ABHD12BQ7Z5M8 362 aaPredicted RBP9.18□□□□□ -0.94
RTN4-211ENST00000438462 MDP1Q86V88 176 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 ZBED8Q8IZ13 594 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 POMGNT2Q8NAT1 580 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 IL17RDQ8NFM7 739 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 OR4C13Q8NGP0 309 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 MAGEE2Q8TD90 523 aaPredicted RBP9.18□□□□□ -0.94
RTN4-211ENST00000438462 DNAJA3Q96EY1 480 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 ZNF317Q96PQ6 595 aaPredicted RBP9.18□□□□□ -0.94
RTN4-211ENST00000438462 DCLRE1CQ96SD1 692 aaKnown RBP9.18□□□□□ -0.94
RTN4-211ENST00000438462 TRIM15Q9C019 465 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 NMUR2Q9GZQ4 415 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 LAT2Q9GZY6 243 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 PARPBPQ9NWS1 579 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 KCNG2Q9UJ96 466 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 ZNF780BQ9Y6R6 833 aa9.18□□□□□ -0.94
RTN4-211ENST00000438462 ZCWPW2A0A1B0GU75 182 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 GXYLT2A0PJZ3 443 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 STK16O75716 305 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 KRT33AO76009 404 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 KLK1P06870 262 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 PTX3P26022 381 aaPredicted RBP9.17□□□□□ -0.94
RTN4-211ENST00000438462 CTNNA1P35221 906 aaKnown RBP9.17□□□□□ -0.94
RTN4-211ENST00000438462 CUL3Q13618 768 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 TMEM155Q4W5P6 130 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 ATP6AP1LQ52LC2 224 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 GLE1Q53GS7 698 aaKnown RBP9.17□□□□□ -0.94
RTN4-211ENST00000438462 GRHL2Q6ISB3 625 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 NHLRC1Q6VVB1 395 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 VSTM4Q8IW00 320 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 LMNTD2Q8IXW0 634 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 RPP25LQ8N5L8 163 aaKnown RBP9.17□□□□□ -0.94
RTN4-211ENST00000438462 SCCPDHQ8NBX0 429 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 ZNF524Q96C55 264 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 CCDC126Q96EE4 140 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 ZHX1-C8orf76Q96EF9 292 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 AURKBQ96GD4 344 aaPredicted RBP9.17□□□□□ -0.94
RTN4-211ENST00000438462 PDLIM5Q96HC4 596 aaKnown RBP9.17□□□□□ -0.94
RTN4-211ENST00000438462 ZMAT4Q9H898 229 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 CNOT10Q9H9A5 744 aaKnown RBP9.17□□□□□ -0.94
RTN4-211ENST00000438462 C20orf96Q9NUD7 363 aaPredicted RBP9.17□□□□□ -0.94
RTN4-211ENST00000438462 SENP1Q9P0U3 644 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 KIF17Q9P2E2 1029 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 GPR160Q9UJ42 338 aa9.17□□□□□ -0.94
RTN4-211ENST00000438462 A0A096LPK6 155 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 ZNF587BE7ETH6 402 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 AP3B1O00203 1094 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 SCDO00767 359 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 OIP5O43482 229 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 CCNT2O60583 730 aaKnown RBP9.16□□□□□ -0.94
RTN4-211ENST00000438462 COQ9O75208 318 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 PTMAP06454 111 aaKnown RBP9.16□□□□□ -0.94
RTN4-211ENST00000438462 NGFRP08138 427 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 CCDC175P0C221 793 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 MYF6P23409 242 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 ALDH9A1P49189 494 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 MYL5Q02045 173 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 SLC29A2Q14542 456 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 HSP90AA5PQ58FG0 334 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 ADAMTSL2Q86TH1 951 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 MISPQ8IVT2 679 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 CALML6Q8TD86 181 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 THOC1Q96FV9 657 aaKnown RBP9.16□□□□□ -0.94
RTN4-211ENST00000438462 CLPTM1LQ96KA5 538 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 NUDT16L1Q9BRJ7 211 aaKnown RBP9.16□□□□□ -0.94
RTN4-211ENST00000438462 NANOGQ9H9S0 305 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 ZNRD1Q9P1U0 126 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 HIF3AQ9Y2N7 669 aa9.16□□□□□ -0.94
RTN4-211ENST00000438462 IGHV1-69DA0A0B4J2H0 117 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 KIR2DS1A0A191URI9 304 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 PLOD3O60568 738 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 KCNH1O95259 989 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 IGHV1-69P01742 117 aa9.15□□□□□ -0.94
RTN4-211ENST00000438462 ZNF35P13682 527 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms