RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 ARIH2OSQ8N7S6 290 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 DTWD2Q8NBA8 298 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 FAM98AQ8NCA5 519 aaKnown RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 OR5W2Q8NH69 310 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 C16orf52Q8NHV5 167 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 TEX12Q9BXU0 123 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 OR2B2Q9GZK3 357 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 RNF32Q9H0A6 362 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 FOLH1BQ9HBA9 442 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 PNO1Q9NRX1 252 aaKnown RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 PLSCR3Q9NRY6 295 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 BABAM2Q9NXR7 383 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 NTMQ9P121 344 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 NLKQ9UBE8 527 aa8.7□□□□□ -1.02
CUX1-206ENST00000437600 NOSIPQ9Y314 301 aaKnown RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 EXOSC1Q9Y3B2 195 aaKnown RBP8.7□□□□□ -1.02
CUX1-206ENST00000437600 TNRC6BQ9UPQ9 1833 aaKnown RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 MEIOCA2RUB1 952 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 ZSCAN5BA6NJL1 495 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 MCIDASD6RGH6 385 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 LMO7DNF2Z398 122 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 ICMTO60725 284 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 ELK1P19419 428 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 AFF3P51826 1226 aaKnown RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 CFHR1Q03591 330 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 STK11Q15831 433 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 ODF4Q2M2E3 257 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 SLC25A35Q3KQZ1 300 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 PRAMEF8Q5VWM4 474 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 PRAMEF7Q5VXH5 474 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 CEACAM19Q7Z692 300 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 OR6K6Q8NGW6 343 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 KISS1RQ969F8 398 aaPredicted RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 CTHRC1Q96CG8 243 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 ATF6BQ99941 703 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 PDCD1LG2Q9BQ51 273 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 PRMT8Q9NR22 394 aaPredicted RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 DUSP22Q9NRW4 184 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 ATXN7L1Q9ULK2 861 aaPredicted RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 A0A0G2JMP0 313 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 A0A0X1KG70 313 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 FAM221BA6H8Z2 402 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 GTPBP1O00178 669 aaKnown RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 POLR1CO15160 346 aaPredicted RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 OIP5O43482 229 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 SCO2O43819 266 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 AKAP8O43823 692 aaKnown RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 HLA-DPB1P04440 258 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 HMGN1P05114 100 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 CT45A8P0DMV1 189 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 CT45A9P0DMV2 189 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 SRP9P49458 86 aaKnown RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 ERVK-25P63136 954 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 SCN1BQ07699 218 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 CT45A2Q5DJT8 189 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 C1orf189Q5VU69 101 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 PMS2CLQ68D20 193 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 LURAP1LQ8IV03 231 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 OR4M2Q8NGB6 313 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 FAM174AQ8TBP5 190 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 CHAC2Q8WUX2 184 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 SMPDL3BQ92485 455 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 DEPDC7Q96QD5 511 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 OR8D2Q9GZM6 311 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 TWSG1Q9GZX9 223 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 RANGRFQ9HD47 186 aaPredicted RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 MRPS18AQ9NVS2 196 aaKnown RBP8.69□□□□□ -1.02
CUX1-206ENST00000437600 ZMIZ1Q9ULJ6 1067 aa8.69□□□□□ -1.02
CUX1-206ENST00000437600 A0A0B4J293 547 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 SMLR1H3BR10 107 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 H7C1C5 153 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 RNF13O43567 381 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 GPANK1O95872 356 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 F13BP05160 661 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 BTF3P20290 206 aaKnown RBP8.68□□□□□ -1.02
CUX1-206ENST00000437600 LCN6P62502 163 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 ANGPT1Q15389 498 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 C14orf28Q4W4Y0 310 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 CEP78Q5JTW2 689 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 ATAD3CQ5T2N8 411 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 AGAP6Q5VW22 663 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 SLC38A6Q8IZM9 456 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 RASD2Q96D21 266 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 AGAP4Q96P64 663 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 NUDT22Q9BRQ3 303 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 RTN4RQ9BZR6 473 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 LYRM4Q9HD34 91 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 ASB6Q9NWX5 421 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 KIF26BQ2KJY2 2108 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 PRRC2CQ9Y520 2896 aaKnown RBP8.68□□□□□ -1.02
CUX1-206ENST00000437600 CEP250Q9BV73 2442 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 IQCMA0A1B0GVH7 501 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 CPED1A4D0V7 1026 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 TMEM150CB9EJG8 249 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 KHNYNO15037 678 aaKnown RBP8.68□□□□□ -1.02
CUX1-206ENST00000437600 ALX3O95076 343 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 CSTAP01040 98 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 SLC35E2P0CK97 266 aa8.68□□□□□ -1.02
CUX1-206ENST00000437600 AVPR2P30518 371 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms