RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 CCDC197Q8NCU1 140 aa16.37■□□□□ 0.21
HLA-F-220ENST00000434407 OR4D11Q8NGI4 311 aa16.37■□□□□ 0.21
HLA-F-220ENST00000434407 OR6T1Q8NGN1 323 aa16.37■□□□□ 0.21
HLA-F-220ENST00000434407 SLC26A7Q8TE54 656 aa16.37■□□□□ 0.21
HLA-F-220ENST00000434407 SLC38A4Q969I6 547 aa16.37■□□□□ 0.21
HLA-F-220ENST00000434407 MARVELD3Q96A59 401 aa16.37■□□□□ 0.21
HLA-F-220ENST00000434407 PSD2Q9BQI7 771 aa16.37■□□□□ 0.21
HLA-F-220ENST00000434407 RBM24Q9BX46 236 aaKnown RBP16.37■□□□□ 0.21
HLA-F-220ENST00000434407 PCDHAC1Q9H158 963 aa16.37■□□□□ 0.21
HLA-F-220ENST00000434407 KLHL9Q9P2J3 617 aa16.37■□□□□ 0.21
HLA-F-220ENST00000434407 KLHL13Q9P2N7 655 aa16.37■□□□□ 0.21
HLA-F-220ENST00000434407 IGKV3D-15A0A087WSY6 115 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 LIPT2A6NK58 231 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 PLGP00747 810 aaPredicted RBP16.36■□□□□ 0.21
HLA-F-220ENST00000434407 IFNA14P01570 189 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 YES1P07947 543 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 PNMTP11086 282 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 CPA2P48052 419 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 GSK3BP49841 420 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 CTBP2P56545 445 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 SLC35A1P78382 337 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 SORDQ00796 357 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 SWT1Q5T5J6 900 aaKnown RBP16.36■□□□□ 0.21
HLA-F-220ENST00000434407 ULK3Q6PHR2 472 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 LUZP2Q86TE4 346 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 MCEMP1Q8IX19 187 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 ZNF295-AS1Q8N0V1 137 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 ZHX1-C8orf76Q96EF9 292 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 TACO1Q9BSH4 297 aaKnown RBP16.36■□□□□ 0.21
HLA-F-220ENST00000434407 OPN3Q9H1Y3 402 aaPredicted RBP16.36■□□□□ 0.21
HLA-F-220ENST00000434407 ALG2Q9H553 416 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 TMEM27Q9HBJ8 222 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 SLC24A3Q9HC58 644 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 SPAG4Q9NPE6 437 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 GALNT8Q9NY28 637 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 RPS6KB2Q9UBS0 482 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 BAG5Q9UL15 447 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 SPG11Q96JI7 2443 aa16.36■□□□□ 0.21
HLA-F-220ENST00000434407 A0A087WUJ7 227 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 CYSRT1A8MQ03 144 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 ZNF724A8MTY0 619 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 EIF1BO60739 113 aaKnown RBP16.35■□□□□ 0.21
HLA-F-220ENST00000434407 UQCRC1P31930 480 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 IDUAP35475 653 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 SLC16A1P53985 500 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 OR2B6P58173 313 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 NCALDP61601 193 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 RASGEF1BQ0VAM2 473 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 ALG10BQ5I7T1 473 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 C1orf140Q5VVS0 124 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 ZNF613Q6PF04 617 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 KIF18BQ86Y91 864 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 RBM45Q8IUH3 476 aaKnown RBP16.35■□□□□ 0.21
HLA-F-220ENST00000434407 TUSC5Q8IXB3 177 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 ZNF610Q8N9Z0 462 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 SLC47A1Q96FL8 570 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 MCHR1Q99705 422 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 PTDSS2Q9BVG9 487 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 PROCRQ9UNN8 238 aa16.35■□□□□ 0.21
HLA-F-220ENST00000434407 IGKV1D-42A0A075B6H8 117 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 ELOA3DA6NLF2 546 aaPredicted RBP16.34■□□□□ 0.21
HLA-F-220ENST00000434407 ZNF716A6NP11 495 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 ZNF814B7Z6K7 855 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 SMNDC1O75940 238 aaKnown RBP eCLIP16.34■□□□□ 0.21
HLA-F-220ENST00000434407 LYPD3O95274 346 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 GPIP06744 558 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 FPR1P21462 350 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 ELOA3BQ3SY89 546 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 CYBRD1Q53TN4 286 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 PAQR6Q6TCH4 344 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 C5orf46Q6UWT4 87 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 LINC00114Q6XXX2 140 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 NUFIP2Q7Z417 695 aaKnown RBP16.34■□□□□ 0.21
HLA-F-220ENST00000434407 TSPYL5Q86VY4 417 aaPredicted RBP16.34■□□□□ 0.21
HLA-F-220ENST00000434407 PGAM4Q8N0Y7 254 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 ELOA3Q8NG57 546 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 PIGXQ8TBF5 258 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 PROX1Q92786 737 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 DNAJA3Q96EY1 480 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 ELOVL5Q9NYP7 299 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 KCNN3Q9UGI6 736 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 SLC9A8Q9Y2E8 581 aa16.34■□□□□ 0.21
HLA-F-220ENST00000434407 LRBAP50851 2863 aa16.33■□□□□ 0.21
HLA-F-220ENST00000434407 AKAP6Q13023 2319 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 FTCDNL1E5RQL4 147 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 CXCR6O00574 342 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 RAMP1O60894 148 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 THY1P04216 161 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 PRF1P14222 555 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 CD79BP40259 229 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 P2RY4P51582 365 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 CDH12P55289 794 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 SELENOWP63302 87 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 CEACAM7Q14002 265 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 FXNQ16595 210 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 ENTPD8Q5MY95 495 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 TMEM201Q5SNT2 666 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 CARM1Q86X55 608 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 CCDC103Q8IW40 242 aa16.33■□□□□ 0.2
HLA-F-220ENST00000434407 MFSD8Q8NHS3 518 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms