RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 PLA2G12AQ9BZM1 189 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SLC6A15Q9H2J7 730 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 FN3KQ9H479 309 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CHODLQ9H9P2 273 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SDHAF2Q9NX18 166 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 TMEM161AQ9NX61 479 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 DLL3Q9NYJ7 618 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 RDH8Q9NYR8 311 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 TRPM5Q9NZQ8 1165 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 ABRACLQ9P1F3 81 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 LPAR3Q9UBY5 353 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SLC9A8Q9Y2E8 581 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 ZNF175Q9Y473 711 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CACNA1IQ9P0X4 2223 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 PLXNB3Q9ULL4 1909 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 TRAV1-2A0A0B4J238 106 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 A0A1B0GUH1 482 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 LIPT2A6NK58 231 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 HMSDA8MTL9 139 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 NEDD8-MDP1E9PL57 170 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 ZNF593O00488 134 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 LRRTM2O43300 516 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 GALR3O60755 368 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SLC16A8O95907 504 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 EPPINO95925 133 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CD1AP06126 327 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 NMBP08949 121 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 GIPP09681 153 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 ACP5P13686 325 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 HMGA1P17096 107 aaKnown RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 RAB3AP20336 220 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 FPR3P25089 353 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 NUP62P37198 522 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 FNTBP49356 437 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CCT3P49368 545 aaKnown RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 PRLHRP49683 370 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 GATMP50440 423 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 ARPP19P56211 112 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 TAS2R43P59537 309 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CNTN1Q12860 1018 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 IL10RAQ13651 578 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 GNA13Q14344 377 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 OPCMLQ14982 345 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 RNFT1Q5M7Z0 435 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 HENMT1Q5T8I9 393 aaKnown RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SLC8B1Q6J4K2 584 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 LYPD4Q6UWN0 246 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 DEF8Q6ZN54 512 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 RRM2BQ7LG56 351 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 GPR135Q8IZ08 494 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 APCDD1Q8J025 514 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 TOMM5Q8N4H5 51 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 BMPERQ8N8U9 685 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 GPR156Q8NFN8 814 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 OR5AK3PQ8NH89 298 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SMIM4Q8WVI0 70 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 ASB13Q8WXK3 278 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SLC9A6Q92581 669 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 CORO2AQ92828 525 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 LINC00052Q96N35 136 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SECISBP2Q96T21 854 aaKnown RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 TIMP4Q99727 224 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 WFDC6Q9BQY6 131 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 PINK1Q9BXM7 581 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 DNTTIP1Q9H147 329 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 BABAM2Q9NXR7 383 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 P2RX2Q9UBL9 471 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 FBXL21Q9UKT6 434 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 SCML1Q9UN30 329 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 GPR55Q9Y2T6 319 aaPredicted RBP7.44□□□□□ -1.22
VTI1A-202ENST00000432306 KCNK7Q9Y2U2 307 aa7.44□□□□□ -1.22
VTI1A-202ENST00000432306 DMDP11532 3685 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 C2orf16Q68DN1 1984 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 A0A087WUU8 490 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 SLC22A23A1A5C7 686 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 OR2M5A3KFT3 312 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 MPTX1A8MV57 137 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 ANHXE9PGG2 379 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 K7ERQ8 282 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 AIPO00170 330 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 PRRG1O14668 218 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 TBL1XO60907 577 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 B4GALT2O60909 372 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 FZD7O75084 574 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 NCR1O76036 304 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 SCAF4O95104 1147 aaKnown RBP7.43□□□□□ -1.22
VTI1A-202ENST00000432306 AKR7A3O95154 331 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 EFEMP2O95967 443 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 IL5P05113 134 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 IL3P08700 152 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 CTSAP10619 480 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 PRKACAP17612 351 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 CD79BP40259 229 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 OMPP47874 163 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 METAP1P53582 386 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 S100A12P80511 92 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 GAMTQ14353 236 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 ARHGAP19Q14CB8 494 aa7.43□□□□□ -1.22
VTI1A-202ENST00000432306 TESK1Q15569 626 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms