RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 MEAF6Q9HAF1 191 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 CBLN4Q9NTU7 201 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 AIG1Q9NVV5 245 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 ADPRHL2Q9NX46 363 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 MOKQ9UQ07 419 aa12.49□□□□□ -0.41
SMARCE1-205ENST00000431889 RNF212BA8MTL3 300 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 BIRC5O15392 142 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 FRS3O43559 492 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 PGRP06401 933 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 CLNS1AP54105 237 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 H3F3AP84243 136 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 EPS8Q12929 822 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 SLC17A1Q14916 467 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 PDK3Q15120 406 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 RAB35Q15286 201 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 KLHL17Q6TDP4 642 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 ZNF836Q6ZNA1 936 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 IL17RELQ6ZVW7 336 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 P2RY8Q86VZ1 359 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 HOMEZQ8IX15 550 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 KDM8Q8N371 416 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 ARIH2OSQ8N7S6 290 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 ZIC4Q8N9L1 334 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 DDIT4LQ96D03 193 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 FBXO17Q96EF6 278 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 ADAD1Q96M93 576 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 ZIM3Q96PE6 472 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 USB1Q9BQ65 265 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 TMEM109Q9BVC6 243 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 EXOSC3Q9NQT5 275 aaKnown RBP12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 POLE3Q9NRF9 147 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 MALT1Q9UDY8 824 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 BTNL2Q9UIR0 455 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 ATRQ13535 2644 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 FBN3Q75N90 2809 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 MXRA5Q9NR99 2828 aa12.48□□□□□ -0.41
SMARCE1-205ENST00000431889 A0A096LNT2 108 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 CFAP73A6NFT4 308 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 A8MV72 311 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 NR5A2O00482 541 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 GPR171O14626 319 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 BCHEP06276 602 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 PTAFRP25105 342 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 SLC16A1P53985 500 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 SLC35A1P78382 337 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 VHLLQ6RSH7 139 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 CLEC2AQ6UVW9 174 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 PHC2Q8IXK0 858 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 CLIP4Q8N3C7 705 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 C3orf49Q96BT1 292 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 TRNT1Q96Q11 434 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 NAA11Q9BSU3 229 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 SLC17A5Q9NRA2 495 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 SEC14L4Q9UDX3 406 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 GPR45Q9Y5Y3 372 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 PDLIM1O00151 329 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 TM9SF1O15321 606 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 LGI1O95970 557 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 SLC1A3P43003 542 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 CRATP43155 626 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 WDR4P57081 412 aaKnown RBP12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 CARTPTQ16568 116 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 TMEM249Q2WGJ8 235 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 SLC9B1Q4ZJI4 515 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 C6orf52Q5T4I8 152 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 HHATQ5VTY9 493 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 ATG16L1Q676U5 607 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 WDR93Q6P2C0 686 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 LRRC74BQ6ZQY2 392 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 LINGO2Q7L985 606 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 AAED1Q7RTV5 226 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 HIPK1Q86Z02 1210 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 DEPDC4Q8N2C3 294 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 OR10H5Q8NGA6 315 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 OR9K2Q8NGE7 335 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 OR9I1Q8NGQ6 314 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 OR52P1PQ8NH57 321 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 VPS33AQ96AX1 596 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 ALKBH3Q96Q83 286 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 SEC61A2Q9H9S3 476 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 BARX1Q9HBU1 254 aaPredicted RBP12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 TRAPPC4Q9Y296 219 aa12.47□□□□□ -0.41
SMARCE1-205ENST00000431889 A0A096LPE4 126 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 A0A1W2PPZ6 126 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 RFXANKO14593 260 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 NUDT7P0C024 238 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 ZNF16P17020 682 aaPredicted RBP12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 RPS4Y1P22090 263 aaKnown RBP12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 CXCR1P25024 350 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 ACAA2P42765 397 aaKnown RBP12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 SELENOPP49908 381 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 NRF1Q16656 503 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 ANKS4BQ8N8V4 417 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 MTHFD2LQ9H903 347 aaPredicted RBP12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 HAO1Q9UJM8 370 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 MGAT4BQ9UQ53 548 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 SLC9A8Q9Y2E8 581 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 CHST2Q9Y4C5 530 aa12.46□□□□□ -0.42
SMARCE1-205ENST00000431889 LIPT2A6NK58 231 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms