RNA–Protein interactions for RNA: ENST00000431533.6

RPL28-204, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-204ENST00000431533 PRSS50Q9UI38 385 aa13.6□□□□□ -0.23
RPL28-204ENST00000431533 LEF1Q9UJU2 399 aaPredicted RBP13.6□□□□□ -0.23
RPL28-204ENST00000431533 IFT52Q9Y366 437 aa13.6□□□□□ -0.23
RPL28-204ENST00000431533 HDGFL3Q9Y3E1 203 aa13.6□□□□□ -0.23
RPL28-204ENST00000431533 RAI1Q7Z5J4 1906 aaPredicted RBP13.6□□□□□ -0.23
RPL28-204ENST00000431533 ROS1P08922 2347 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 ZC3H12DA2A288 527 aaKnown RBP13.59□□□□□ -0.23
RPL28-204ENST00000431533 EVPLLA8MZ36 301 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 PGM3O95394 542 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 PMS2P2O95744 297 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 ADAP00813 363 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 THBDP07204 575 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 ARAFP10398 606 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 BMP2P12643 396 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 IL32P24001 234 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 IRX1P78414 480 aaPredicted RBP13.59□□□□□ -0.23
RPL28-204ENST00000431533 HOXC5Q00444 222 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 VEZF1Q14119 521 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 CLEC12BQ2HXU8 276 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 ADAM5Q6NVV9 412 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 PODNL1Q6PEZ8 512 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 MTDHQ86UE4 582 aaKnown RBP13.59□□□□□ -0.23
RPL28-204ENST00000431533 CCDC103Q8IW40 242 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 ZNF100Q8IYN0 542 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 IGFBPL1Q8WX77 278 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 GTPBP3Q969Y2 492 aaKnown RBP13.59□□□□□ -0.23
RPL28-204ENST00000431533 IKZF5Q9H5V7 419 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 ZNF385DQ9H6B1 395 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 ARMC7Q9H6L4 198 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 ESRP2Q9H6T0 727 aaKnown RBP13.59□□□□□ -0.23
RPL28-204ENST00000431533 TMEM181Q9P2C4 612 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 ING1Q9UK53 422 aaPredicted RBP13.59□□□□□ -0.23
RPL28-204ENST00000431533 LAMP3Q9UQV4 416 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 NDUFAF1Q9Y375 327 aa13.59□□□□□ -0.23
RPL28-204ENST00000431533 FREM1Q5H8C1 2179 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 TRBV5-3A0A0A0MS03 114 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 FAAHO00519 579 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 TLX2O43763 284 aaPredicted RBP13.58□□□□□ -0.24
RPL28-204ENST00000431533 RAMP1O60894 148 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 IGHV3-9P01782 118 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 VIMP08670 466 aaKnown RBP13.58□□□□□ -0.24
RPL28-204ENST00000431533 TROVE2P10155 538 aaKnown RBP eCLIP13.58□□□□□ -0.24
RPL28-204ENST00000431533 IMPDH2P12268 514 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 PSMB1P20618 241 aaKnown RBP13.58□□□□□ -0.24
RPL28-204ENST00000431533 EDNRAP25101 427 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 AQP1P29972 269 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 ACAA2P42765 397 aaKnown RBP13.58□□□□□ -0.24
RPL28-204ENST00000431533 OR3A2P47893 321 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 CLK1P49759 484 aaKnown RBP13.58□□□□□ -0.24
RPL28-204ENST00000431533 CDK6Q00534 326 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 BNIP2Q12982 314 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 TNK1Q13470 666 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 SCARB2Q14108 478 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 HSP90B2PQ58FF3 399 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 ABLIM2Q6H8Q1 611 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 WBP2NLQ6ICG8 309 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 GALNT5Q7Z7M9 940 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 GABRG1Q8N1C3 465 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 STON2Q8WXE9 905 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 AKAP1Q92667 903 aaKnown RBP eCLIP13.58□□□□□ -0.24
RPL28-204ENST00000431533 FBXW5Q969U6 566 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 S100PBPQ96BU1 408 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 CPPED1Q9BRF8 314 aaPredicted RBP13.58□□□□□ -0.24
RPL28-204ENST00000431533 SIKE1Q9BRV8 207 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 TMEM204Q9BSN7 226 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 BCL2L10Q9HD36 194 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 FGFR1OP2Q9NVK5 253 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 TMEM45AQ9NWC5 275 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 EMC3Q9P0I2 261 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 CORO2BQ9UQ03 480 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 CHST2Q9Y4C5 530 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 RNF115Q9Y4L5 304 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 USF3Q68DE3 2245 aa13.58□□□□□ -0.24
RPL28-204ENST00000431533 COL6A5A8TX70 2615 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 ZNF814B7Z6K7 855 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 ZNF208O43345 1280 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 GCM2O75603 506 aaPredicted RBP13.57□□□□□ -0.24
RPL28-204ENST00000431533 LYZL6O75951 148 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 CD3EP07766 207 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 FKBP2P26885 142 aaKnown RBP13.57□□□□□ -0.24
RPL28-204ENST00000431533 MTPNP58546 118 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 SLC35A1P78382 337 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 NFYCQ13952 458 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 ZSWIM7Q19AV6 140 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 SFRP5Q5T4F7 317 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 PRAMEF8Q5VWM4 474 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 PRAMEF7Q5VXH5 474 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 REEP3Q6NUK4 255 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 DLEU7Q6UYE1 221 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 SSX8Q7RTT4 187 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 RETREG3Q86VR2 466 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 KRT73Q86Y46 540 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 UBE2J2Q8N2K1 259 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 PIGXQ8TBF5 258 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 HSD17B8Q92506 261 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 KISS1RQ969F8 398 aaPredicted RBP13.57□□□□□ -0.24
RPL28-204ENST00000431533 NAA11Q9BSU3 229 aaPredicted RBP13.57□□□□□ -0.24
RPL28-204ENST00000431533 ADAM19Q9H013 955 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 ADAM21Q9UKJ8 722 aa13.57□□□□□ -0.24
RPL28-204ENST00000431533 NOSIPQ9Y314 301 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms