RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 CSF3P09919 207 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 SLC25A16P16260 332 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 IL7RP16871 459 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 CCNA2P20248 432 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 TACR3P29371 465 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 FABP6P51161 128 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 LOXL1Q08397 574 aaPredicted RBP13.07□□□□□ -0.32
MSH5-208ENST00000429846 SYPL1Q16563 259 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 ELOA3BQ3SY89 546 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 CHRFAM7AQ494W8 412 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 HMBOX1Q6NT76 420 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 ANKFN1Q8N957 763 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 ELOA3Q8NG57 546 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 OR52E4Q8NGH9 312 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 DNAJA3Q96EY1 480 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 SF3B5Q9BWJ5 86 aaKnown RBP13.07□□□□□ -0.32
MSH5-208ENST00000429846 MTHFD2LQ9H903 347 aaPredicted RBP13.07□□□□□ -0.32
MSH5-208ENST00000429846 SLC17A5Q9NRA2 495 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 ALPK2Q86TB3 2170 aa13.07□□□□□ -0.32
MSH5-208ENST00000429846 A0A1W2PR80 420 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 FAM234BA2RU67 622 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 CCDC154A6NI56 674 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 AP3D1O14617 1153 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 WNT11O96014 354 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 GPIP06744 558 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 IMPDH2P12268 514 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 PTNP21246 168 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 PAX7P23759 505 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 MPGP29372 298 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 VLDLRP98155 873 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 CHRNB3Q05901 458 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 EPS8Q12929 822 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 STX3Q13277 289 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 GSTA3Q16772 222 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 TMEM249Q2WGJ8 235 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 C6orf52Q5T4I8 152 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 MRPL2Q5T653 305 aaKnown RBP13.06□□□□□ -0.32
MSH5-208ENST00000429846 KLHL24Q6TFL4 600 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 B3GLCTQ6Y288 498 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 ABHD12BQ7Z5M8 362 aaPredicted RBP13.06□□□□□ -0.32
MSH5-208ENST00000429846 HMGN2P46Q86SG4 172 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 PEX5LQ8IYB4 626 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 POMGNT2Q8NAT1 580 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 GLB1L3Q8NCI6 653 aaPredicted RBP13.06□□□□□ -0.32
MSH5-208ENST00000429846 BOD1Q96IK1 185 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 OR52E6Q96RD3 313 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 TNFRSF13CQ96RJ3 184 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 REPIN1Q9BWE0 567 aaKnown RBP13.06□□□□□ -0.32
MSH5-208ENST00000429846 OBP2BQ9NPH6 170 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 SLC7A10Q9NS82 523 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 AIG1Q9NVV5 245 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 TMEM160Q9NX00 188 aa13.06□□□□□ -0.32
MSH5-208ENST00000429846 YLPM1P49750 1951 aaKnown RBP13.06□□□□□ -0.32
MSH5-208ENST00000429846 FBN1P35555 2871 aaKnown RBP13.06□□□□□ -0.32
MSH5-208ENST00000429846 KRT75O95678 551 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 ALDOCP09972 364 aaKnown RBP13.05□□□□□ -0.32
MSH5-208ENST00000429846 NR2F1P10589 423 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 BGNP21810 368 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 FOXG1P55316 489 aaPredicted RBP13.05□□□□□ -0.32
MSH5-208ENST00000429846 PRPS1P60891 318 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 UFM1P61960 85 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 LIN52Q52LA3 116 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 OTUD3Q5T2D3 398 aaPredicted RBP13.05□□□□□ -0.32
MSH5-208ENST00000429846 TSPO2Q5TGU0 170 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 SPATA19Q7Z5L4 167 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 WDR31Q8NA23 367 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 FAM168AQ92567 244 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 TEX37Q96LM6 180 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 ZBTB18Q99592 522 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 ADAM19Q9H013 955 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 CALML5Q9NZT1 146 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 P2RX2Q9UBL9 471 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 CDC42EP3Q9UKI2 254 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 PMF1-BGLAPU3KQ54 211 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 DSPPQ9NZW4 1301 aa13.05□□□□□ -0.32
MSH5-208ENST00000429846 ZC3H12DA2A288 527 aaKnown RBP13.04□□□□□ -0.32
MSH5-208ENST00000429846 CDHR4A6H8M9 788 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 LIPT2A6NK58 231 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 AQP7P3A6NL99 342 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 FAM157CP0CG43 387 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 CXCR1P25024 350 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 APOBEC3AP31941 199 aaPredicted RBP13.04□□□□□ -0.32
MSH5-208ENST00000429846 CDKN2CP42773 168 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 EFNA4P52798 201 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 COPZ1P61923 177 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 BST1Q10588 318 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 ZSWIM7Q19AV6 140 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 C9orf135Q5VTT2 229 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 ZNF621Q6ZSS3 439 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 ZNF525Q8N782 197 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 OR9K2Q8NGE7 335 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 C1QTNF6Q9BXI9 259 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 ATP23Q9Y6H3 246 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 ARFGEF3Q5TH69 2177 aa13.04□□□□□ -0.32
MSH5-208ENST00000429846 A0A096LPI6 279 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 OR6C65A6NJZ3 312 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 TRPC5OSA6NMA1 111 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 RNF212BA8MTL3 300 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 SDHDO14521 159 aa13.03□□□□□ -0.32
MSH5-208ENST00000429846 RFXANKO14593 260 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms