RNA–Protein interactions for RNA: ENST00000428726.6

CD44-208, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CD44, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-208ENST00000428726 NID1P14543 1247 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 EIF1AXP47813 144 aaKnown RBP7.68□□□□□ -1.18
CD44-208ENST00000428726 RORCP51449 518 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 UBE2IP63279 158 aaKnown RBP7.68□□□□□ -1.18
CD44-208ENST00000428726 MRPS21P82921 87 aaKnown RBP7.68□□□□□ -1.18
CD44-208ENST00000428726 CFHR1Q03591 330 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 ETFDHQ16134 617 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 MBOAT2Q6ZWT7 520 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 BMPERQ8N8U9 685 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 ASCC1Q8N9N2 400 aaKnown RBP7.68□□□□□ -1.18
CD44-208ENST00000428726 BEST4Q8NFU0 473 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 SMIM10Q96HG1 83 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 ST6GAL2Q96JF0 529 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 HS6ST2Q96MM7 605 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 HDHD2Q9H0R4 259 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 GALNT9Q9HCQ5 603 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 APMAPQ9HDC9 416 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 TESQ9UGI8 421 aaKnown RBP7.68□□□□□ -1.18
CD44-208ENST00000428726 A0A075B6Q4 140 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 TRAV6A0A075B6T7 132 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 LANCL1O43813 399 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 OR5F1O95221 314 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 TIAF1O95411 115 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 PTTG1O95997 202 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 CT45A8P0DMV1 189 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 CT45A9P0DMV2 189 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 GAS1P54826 345 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 ZNHIT3Q15649 155 aaPredicted RBP7.68□□□□□ -1.18
CD44-208ENST00000428726 MEP1BQ16820 701 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 ARHGAP11BQ3KRB8 267 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 CT45A2Q5DJT8 189 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 FAAP20Q6NZ36 180 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 CNIH2Q6PI25 160 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 RASSF6Q6ZTQ3 369 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 CEACAM19Q7Z692 300 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 MRGPREQ86SM8 312 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 CCDC190Q86UF4 302 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 CDK20Q8IZL9 346 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 CDRT4Q8N9R6 151 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 SLC38A9Q8NBW4 561 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 ENKURQ8TC29 256 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 UFD1Q92890 307 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 FGF11Q92914 225 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 PHF21AQ96BD5 680 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 TEAD3Q99594 435 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 TEX12Q9BXU0 123 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 TWSG1Q9GZX9 223 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 TSPAN10Q9H1Z9 355 aaPredicted RBP7.68□□□□□ -1.18
CD44-208ENST00000428726 UBE2ZQ9H832 354 aaPredicted RBP7.68□□□□□ -1.18
CD44-208ENST00000428726 MRPS18AQ9NVS2 196 aaKnown RBP7.68□□□□□ -1.18
CD44-208ENST00000428726 NDUFB11Q9NX14 153 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 ANKRD10Q9NXR5 420 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 STUB1Q9UNE7 303 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 V9GYH0 126 aa7.68□□□□□ -1.18
CD44-208ENST00000428726 RELNP78509 3460 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 A0A0G2JMP0 313 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 A0A0X1KG70 313 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 MEIS3P1A6NDR6 274 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 CHURC1-FNTBB4DL54 471 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 H3BML4 177 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 TEX46H3BTG2 121 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 SLC30A4O14863 429 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 CFIP05156 583 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 SNRPBP14678 240 aaKnown RBP7.67□□□□□ -1.18
CD44-208ENST00000428726 IL11P20809 199 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 ETV6P41212 452 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 HTR2BP41595 481 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 KIR2DL3P43628 341 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 FNTBP49356 437 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 YPEL5P62699 121 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 GPLD1P80108 840 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 RAB40BQ12829 278 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 CDC20Q12834 499 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 CAMK2BQ13554 666 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 DSG2Q14126 1118 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 BCL2A1Q16548 175 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 DECR1Q16698 335 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 MDGA2Q7Z553 956 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 UBQLNLQ8IYU4 475 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 BCORP1Q8N888 145 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 SAMD12Q8N8I0 201 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 TOR1AIP2Q8NFQ8 470 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 OR4M2Q8NGB6 313 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 LILRB4Q8NHJ6 448 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 KCTD7Q96MP8 289 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 ACOXLQ9NUZ1 547 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 PLEKHB1Q9UF11 243 aaPredicted RBP7.67□□□□□ -1.18
CD44-208ENST00000428726 TEKT2Q9UIF3 430 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 TEX13CA0A0J9YWL9 993 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 EIF1AYO14602 144 aaKnown RBP7.67□□□□□ -1.18
CD44-208ENST00000428726 ZNF354AO60765 605 aaPredicted RBP7.67□□□□□ -1.18
CD44-208ENST00000428726 TOXO94900 526 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 CSF3P09919 207 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 RNH1P13489 461 aaKnown RBP7.67□□□□□ -1.18
CD44-208ENST00000428726 S1PR1P21453 382 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 MYL9P24844 172 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 STAT5AP42229 794 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 INPP1P49441 399 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 TDGQ13569 410 aa7.67□□□□□ -1.18
CD44-208ENST00000428726 KRR1Q13601 381 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms