RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 UCN2Q96RP3 112 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 COQ10BQ9H8M1 238 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 HIVEP3Q5T1R4 2406 aa13.04□□□□□ -0.32
SGCE-204ENST00000428696 NKX2-6A6NCS4 301 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 hCG_2039718K7EN88 272 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 DVL2O14641 736 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 KLK2P20151 261 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 DLX5P56178 289 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 SLC35A1P78382 337 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 TRIM25Q14258 630 aaKnown RBP13.03□□□□□ -0.32
SGCE-204ENST00000428696 ZNF239Q16600 458 aaKnown RBP13.03□□□□□ -0.32
SGCE-204ENST00000428696 TTC33Q6PID6 262 aaPredicted RBP13.03□□□□□ -0.32
SGCE-204ENST00000428696 C6orf89Q6UWU4 347 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 GDF7Q7Z4P5 450 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 ADGRE4PQ86SQ3 457 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 CYP4Z1Q86W10 505 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 FAM86B1Q8N7N1 296 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 ABHD3Q8WU67 409 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 SLC38A4Q969I6 547 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 KTI12Q96EK9 354 aaPredicted RBP13.03□□□□□ -0.32
SGCE-204ENST00000428696 PYURFQ96I23 114 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 SEPHS2Q99611 448 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 NAA11Q9BSU3 229 aaPredicted RBP13.03□□□□□ -0.32
SGCE-204ENST00000428696 FNDC11Q9BVV2 318 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 POTEKPQ9BYX7 375 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 AMBRA1Q9C0C7 1298 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 KCNJ16Q9NPI9 418 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 KLHL13Q9P2N7 655 aa13.03□□□□□ -0.32
SGCE-204ENST00000428696 A0A087WUJ7 227 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 A0A0B4J2E0 115 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 A0A1B0GX12 115 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 J3KTA2 159 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 AKR7A3O95154 331 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 CLDN14O95500 239 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 GPIP06744 558 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 IMPDH2P12268 514 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 CEACAM8P31997 349 aaPredicted RBP13.02□□□□□ -0.33
SGCE-204ENST00000428696 MS4A2Q01362 244 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 RASGEF1BQ0VAM2 473 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 CDSNQ15517 529 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 LUZP2Q86TE4 346 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 TSPYL5Q86VY4 417 aaPredicted RBP13.02□□□□□ -0.33
SGCE-204ENST00000428696 CCDC103Q8IW40 242 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 LILRB4Q8NHJ6 448 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 STK35Q8TDR2 534 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 RNF122Q9H9V4 155 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 ACTR3BQ9P1U1 418 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 EMC9Q9Y3B6 208 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 COL12A1Q99715 3063 aa13.02□□□□□ -0.33
SGCE-204ENST00000428696 A0A1W2PNV4 684 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 CLEC18AA5D8T8 446 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 WIPF3A6NGB9 483 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 GSC2O15499 205 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 CHP2O43745 196 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 PMS2P2O95744 297 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 OPRM1P35372 400 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 ERFP50548 548 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 RNPS1Q15287 305 aaKnown RBP13.01□□□□□ -0.33
SGCE-204ENST00000428696 TMEM201Q5SNT2 666 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 OTUD3Q5T2D3 398 aaPredicted RBP13.01□□□□□ -0.33
SGCE-204ENST00000428696 SWT1Q5T5J6 900 aaKnown RBP13.01□□□□□ -0.33
SGCE-204ENST00000428696 TMEM225Q6GV28 225 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 CLEC18BQ6UXF7 455 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 GPAT4Q86UL3 456 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 CLEC18CQ8NCF0 446 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 TAAR8Q969N4 342 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 EPYCQ99645 322 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 C12orf49Q9H741 205 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 C12orf10Q9HB07 376 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 TRAPPC4Q9Y296 219 aa13.01□□□□□ -0.33
SGCE-204ENST00000428696 USP9XQ93008 2570 aaPredicted RBP13□□□□□ -0.33
SGCE-204ENST00000428696 PCNX1Q96RV3 2341 aa13□□□□□ -0.33
SGCE-204ENST00000428696 TRAV36DV7A0A075B6V5 113 aa13□□□□□ -0.33
SGCE-204ENST00000428696 LIPT2A6NK58 231 aa13□□□□□ -0.33
SGCE-204ENST00000428696 PRSS44E7EML9 344 aa13□□□□□ -0.33
SGCE-204ENST00000428696 SMAD9O15198 467 aaKnown RBP13□□□□□ -0.33
SGCE-204ENST00000428696 EIF1BO60739 113 aaKnown RBP13□□□□□ -0.33
SGCE-204ENST00000428696 DIRAS1O95057 198 aa13□□□□□ -0.33
SGCE-204ENST00000428696 OR5F1O95221 314 aa13□□□□□ -0.33
SGCE-204ENST00000428696 THY1P04216 161 aa13□□□□□ -0.33
SGCE-204ENST00000428696 ATP6V1B2P21281 511 aa13□□□□□ -0.33
SGCE-204ENST00000428696 ST3GAL3Q11203 375 aa13□□□□□ -0.33
SGCE-204ENST00000428696 EXOC3L2Q2M3D2 409 aa13□□□□□ -0.33
SGCE-204ENST00000428696 NKAIN4Q8IVV8 208 aa13□□□□□ -0.33
SGCE-204ENST00000428696 TUSC5Q8IXB3 177 aa13□□□□□ -0.33
SGCE-204ENST00000428696 SLC43A2Q8N370 569 aa13□□□□□ -0.33
SGCE-204ENST00000428696 TMEM99Q8N816 258 aa13□□□□□ -0.33
SGCE-204ENST00000428696 ZFP3Q96NJ6 502 aa13□□□□□ -0.33
SGCE-204ENST00000428696 CADM1Q9BY67 442 aaKnown RBP13□□□□□ -0.33
SGCE-204ENST00000428696 TRIM15Q9C019 465 aa13□□□□□ -0.33
SGCE-204ENST00000428696 ZNF629Q9UEG4 869 aaPredicted RBP13□□□□□ -0.33
SGCE-204ENST00000428696 LRRK2Q5S007 2527 aa13□□□□□ -0.33
SGCE-204ENST00000428696 IGKV1D-42A0A075B6H8 117 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 OR2T1O43869 369 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 CH25HO95992 272 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 MT-ND1P03886 318 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 HIST1H2ABP04908 130 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 UMPSP11172 480 aa12.99□□□□□ -0.33
SGCE-204ENST00000428696 NQO1P15559 274 aaKnown RBP12.99□□□□□ -0.33
SGCE-204ENST00000428696 AGAP20933 346 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms