RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 ZNF709Q8N972 641 aa6.68□□□□□ -1.34
CNOT4-206ENST00000428680 FAM156AQ8NDB6 213 aa6.68□□□□□ -1.34
CNOT4-206ENST00000428680 OR4N2Q8NGD1 307 aa6.68□□□□□ -1.34
CNOT4-206ENST00000428680 TEX101Q9BY14 249 aa6.68□□□□□ -1.34
CNOT4-206ENST00000428680 GPN1Q9HCN4 374 aaPredicted RBP6.68□□□□□ -1.34
CNOT4-206ENST00000428680 LYRM4Q9HD34 91 aa6.68□□□□□ -1.34
CNOT4-206ENST00000428680 SMPD3Q9NY59 655 aaPredicted RBP6.68□□□□□ -1.34
CNOT4-206ENST00000428680 RDH8Q9NYR8 311 aa6.68□□□□□ -1.34
CNOT4-206ENST00000428680 PDP2Q9P2J9 529 aa6.68□□□□□ -1.34
CNOT4-206ENST00000428680 DIDO1Q9BTC0 2240 aaKnown RBP6.68□□□□□ -1.34
CNOT4-206ENST00000428680 CDH23Q9H251 3354 aa6.68□□□□□ -1.34
CNOT4-206ENST00000428680 SLC22A31A6NKX4 558 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 FOXO6A8MYZ6 492 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 H7C2Y5 167 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 CD22P20273 847 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 TSFMP43897 325 aaKnown RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ATP1B3P54709 279 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 REEP5Q00765 189 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 TRAP1Q12931 704 aaKnown RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 PPP1R8Q12972 351 aaKnown RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 GAB1Q13480 694 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 IL18Q14116 193 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ZNF169Q14929 603 aaPredicted RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 CNN3Q15417 329 aaKnown RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 SWI5Q1ZZU3 235 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 CHRFAM7AQ494W8 412 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 OVCH1Q7RTY7 1134 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ISCA2Q86U28 154 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 MARCH3Q86UD3 253 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 PLD6Q8N2A8 252 aaKnown RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 TMEM185AQ8NFB2 350 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 OR13C3Q8NGS6 347 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ZNF582Q96NG8 517 aaPredicted RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 TBCCD1Q9NVR7 557 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 B3GNT2Q9NY97 397 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 GRHL1Q9NZI5 618 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 LGALS13Q9UHV8 139 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 KLHL21Q9UJP4 597 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ABCG2Q9UNQ0 655 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 PRAMEF27A3QJZ7 478 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 OR6C76A6NM76 312 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ZNF732B4DXR9 585 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 SLC22A2O15244 555 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 NXPH2O95156 264 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 FOLR1P15328 257 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ZNF12P17014 697 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 TNFRSF1AP19438 455 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 NR4A1P22736 598 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 KDELR2P33947 212 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 STT3AP46977 705 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 HTR6P50406 440 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 EIF2B1Q14232 305 aaKnown RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 QPRTQ15274 297 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 FCRL6Q6DN72 434 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 GPR139Q6DWJ6 353 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 MOB3CQ70IA8 216 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ASRGL1Q7L266 308 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 IL17RDQ8NFM7 739 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 OR5D16Q8NGK9 328 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 RAB1CQ92928 201 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 SPACA9Q96E40 222 aaPredicted RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 NKX3-1Q99801 234 aaPredicted RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 RHNO1Q9BSD3 238 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 KATNB1Q9BVA0 655 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 TP63Q9H3D4 680 aaPredicted RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ACSS1Q9NUB1 689 aaPredicted RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 RIMS3Q9UJD0 308 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 NKX2-8O15522 239 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 GDF9O60383 454 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 OR7A10O76100 309 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ZNF432O94892 652 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 PRDX6P30041 224 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 PYCR1P32322 319 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ACTG1P63261 375 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ARL6IP1Q15041 203 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ANKDD1AQ495B1 522 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ZNF789Q5FWF6 425 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 IDNKQ5T6J7 187 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 PWWP2BQ6NUJ5 590 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 SPNS3Q6ZMD2 512 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 TIFABQ6ZNK6 161 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 OR5M1Q8NGP8 315 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 WDR20Q8TBZ3 569 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 TMEM239Q8WW34 195 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ZNF184Q99676 751 aaPredicted RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ZFP64Q9NPA5 681 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 OCIAD1Q9NX40 245 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 ABCA1O95477 2261 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 SONP18583 2426 aaKnown RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 hCG_2014768A0A024R1R8 64 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 KDM4EB2RXH2 506 aaPredicted RBP6.67□□□□□ -1.34
CNOT4-206ENST00000428680 FRS3O43559 492 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 NPPAP01160 153 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 GRPP07492 148 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 FUT4P22083 530 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 IL12AP29459 219 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 S100A7P31151 101 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 PGGT1BP53609 377 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 SELENBP1Q13228 472 aa6.67□□□□□ -1.34
CNOT4-206ENST00000428680 MFAP5Q13361 173 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms