RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 DPP4P27487 766 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 CD1CP29017 333 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 ZNF136P52737 540 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 ACTC1P68032 377 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 ACTA1P68133 377 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 ST3GAL3Q11203 375 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 FAM166AQ6J272 317 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 RPL13AP3Q6NVV1 102 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 B3GLCTQ6Y288 498 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 TMPRSS9Q7Z410 1059 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 TMPRSS11BQ86T26 416 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 METTL23Q86XA0 190 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 ANGPTL5Q86XS5 388 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 CPOQ8IVL8 374 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 MICALL2Q8IY33 904 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 PBX4Q9BYU1 374 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 GPN1Q9HCN4 374 aaPredicted RBP4.74□□□□□ -1.65
RIF1-203ENST00000428287 LHX9Q9NQ69 397 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 UFSP2Q9NUQ7 469 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 SERTAD3Q9UJW9 196 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 TNFSF18Q9UNG2 199 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 IMPA2O14732 288 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 LRG1P02750 347 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 ZGLP1P0C6A0 271 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 OR2T7P0C7T2 308 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 VSIG10L2P0DP72 767 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 DGKEP52429 567 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 MC1RQ01726 317 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 NAE1Q13564 534 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 NDUFAF7Q7L592 441 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 OR2W3Q7Z3T1 314 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 OR2T27Q8NH04 317 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 LRFN5Q96NI6 719 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 LINC00597Q9H2U6 94 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 EGLN3Q9H6Z9 239 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 NMRK2Q9NPI5 230 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 ANHXE9PGG2 379 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 STC2O76061 302 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 CLDN7O95471 211 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 IL3P08700 152 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 LMO1P25800 156 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 GK2Q14410 553 aaPredicted RBP4.74□□□□□ -1.65
RIF1-203ENST00000428287 GPNMBQ14956 572 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 NHLRC1Q6VVB1 395 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 CXXC5Q7LFL8 322 aaKnown RBP4.74□□□□□ -1.65
RIF1-203ENST00000428287 OTOP2Q7RTS6 562 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 CEACAM19Q7Z692 300 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 AUTS2Q8WXX7 1259 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 MCHR2Q969V1 340 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 TMEM41AQ96HV5 264 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 TRMT61BQ9BVS5 477 aaKnown RBP4.74□□□□□ -1.65
RIF1-203ENST00000428287 NOX3Q9HBY0 568 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 HS3ST2Q9Y278 367 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 MAP4K5Q9Y4K4 846 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 MID1O15344 667 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 GCGRP47871 477 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 Q3ZCU0 254 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 SPOUT1Q5T280 376 aaKnown RBP4.74□□□□□ -1.65
RIF1-203ENST00000428287 IL20RBQ6UXL0 311 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 MUC20Q8N307 709 aaPredicted RBP4.74□□□□□ -1.65
RIF1-203ENST00000428287 TTC9BQ8N6N2 239 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 BPIFCQ8NFQ6 507 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 OR5W2Q8NH69 310 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 COQ8AQ8NI60 647 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 SUN3Q8TAQ9 357 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 SORCS1Q8WY21 1168 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 TINF2Q9BSI4 451 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 PRDM13Q9H4Q3 707 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 ZNF768Q9H5H4 540 aaKnown RBP4.74□□□□□ -1.65
RIF1-203ENST00000428287 PTGFRNQ9P2B2 879 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 ZNF629Q9UEG4 869 aaPredicted RBP4.74□□□□□ -1.65
RIF1-203ENST00000428287 ZNF223Q9UK11 482 aaPredicted RBP4.74□□□□□ -1.65
RIF1-203ENST00000428287 TCFL5Q9UL49 500 aa4.74□□□□□ -1.65
RIF1-203ENST00000428287 LOC390937A0A1W2PQ73 354 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 CASTOR2A6NHX0 329 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 TTLL8A6PVC2 850 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 M0R3H8 397 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ICOSLGO75144 302 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 SLC25A12O75746 678 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 POMCP01189 267 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 CD74P04233 296 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 THBS1P07996 1170 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 CALCBP10092 127 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 HIST1H1BP16401 226 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 RELQ04864 619 aaPredicted RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 GAS6Q14393 721 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 C6orf132Q5T0Z8 1188 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 FAM111BQ6SJ93 734 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 THOC6Q86W42 341 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 SPATA2LQ8IUW3 424 aaPredicted RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 CMTM4Q8IZR5 234 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ZNF561Q8N587 486 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 PXYLP1Q8TE99 480 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 POF1BQ8WVV4 589 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 MRPS31Q92665 395 aaKnown RBP4.73□□□□□ -1.65
RIF1-203ENST00000428287 TCEAL4Q96EI5 215 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 PINK1Q9BXM7 581 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 ATG10Q9H0Y0 220 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 SLCO5A1Q9H2Y9 848 aa4.73□□□□□ -1.65
RIF1-203ENST00000428287 TCF7L1Q9HCS4 588 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms