RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 OR52A4PA6NMU1 304 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 HEPACAM2A8MVW5 462 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 SHISA8B8ZZ34 492 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PPP5D1E7EU14 171 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 F8VVB4 439 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 F8VWA3 439 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 RNASEK-C17orf49H0YIS7 233 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PRRG1O14668 218 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 ZNF197O14709 1029 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 SLC16A5O15375 505 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 GPR39O43194 453 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 DLEU1O43261 78 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PPIHO43447 177 aaKnown RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 LANCL1O43813 399 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 TSPAN3O60637 253 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 FBXO24O75426 580 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 MOCS2O96007 188 aaPredicted RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PLGP00747 810 aaPredicted RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 WNT1P04628 370 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 ITGB2P05107 769 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 CRHP06850 196 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 F7P08709 466 aaPredicted RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 CTSHP09668 335 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 TBC1D3HP0C7X1 549 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 LIMS3P0CW19 117 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 LIMS4P0CW20 117 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 CD8BP10966 210 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 TMEM11P17152 192 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 NDUFB7P17568 137 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 HLA-GP17693 338 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 AMD1P17707 334 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 POU3F2P20265 443 aaPredicted RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 ELAVL4P26378 380 aaKnown RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 CHATP28329 748 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PBLDP30039 288 aaPredicted RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 TM4SF1P30408 202 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 THBS2P35442 1172 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 GNALP38405 381 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 MC3RP41968 323 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 RAD52P43351 418 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 NPBWR1P48145 328 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 CX3CR1P49238 355 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 IDH3GP51553 393 aaPredicted RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 ZNF140P52738 457 aaPredicted RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 CEBPGP53567 150 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 SNRPNP63162 240 aaKnown RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 H3F3AP84243 136 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 HMGCS1Q01581 520 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 CACNG1Q06432 222 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 MEF2DQ14814 521 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 ZBTB6Q15916 424 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 C21orf62-AS1Q17RA5 79 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 GFOD2Q3B7J2 385 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 SPDYE7PQ495Y7 208 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 AARDQ4LEZ3 155 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 C14orf28Q4W4Y0 310 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 DCAF10Q5QP82 559 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 FKBP1CQ5VVH2 108 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 FRG2Q64ET8 278 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 TPGS2Q68CL5 300 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 TBC1D3GQ6DHY5 549 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 SFRP4Q6FHJ7 346 aaPredicted RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 MRM1Q6IN84 353 aaKnown RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 ZNF529Q6P280 563 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PGBD2Q6P3X8 592 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 ANKRD16Q6P6B7 361 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 CLEC9AQ6UXN8 241 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 TMIGD1Q6UXZ0 262 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 Q6ZTK2 550 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 P4HA3Q7Z4N8 544 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 CEACAM19Q7Z692 300 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PXKQ7Z7A4 578 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PPP1R3BQ86XI6 285 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 SP8Q8IXZ3 490 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 TMEM192Q8IY95 271 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 GALNT16Q8N428 558 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 RELL2Q8NC24 303 aaPredicted RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 MDGA1Q8NFP4 955 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR4K17Q8NGC6 315 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR5D16Q8NGK9 328 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 OR4C6Q8NH72 309 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 BBS10Q8TAM1 723 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 STT3BQ8TCJ2 826 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 RNASEH2CQ8TDP1 164 aaKnown RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PAQR8Q8TEZ7 354 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 BRI3BPQ8WY22 251 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 ECHDC3Q96DC8 303 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 MRPL38Q96DV4 380 aaKnown RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PIK3IP1Q96FE7 263 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 ABHD17AQ96GS6 310 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 TCTN2Q96GX1 697 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PEX11GQ96HA9 241 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 SENP5Q96HI0 755 aaPredicted RBP5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 BTF3L4Q96K17 158 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 FRG2BQ96QU4 278 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 PHB2Q99623 299 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 MICU1Q9BPX6 476 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 SOX7Q9BT81 388 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 SLC17A9Q9BYT1 436 aa5.2□□□□□ -1.58
VTI1BP4-201ENST00000427516 ACPTQ9BZG2 426 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms