RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 BOLA1Q9Y3E2 137 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 IGHV3-20A0A0C4DH32 117 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 TEX13CA0A0J9YWL9 993 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 OR6C68A6NDL8 312 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 LILRA5A6NI73 299 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 WISP1O95388 367 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 CLPSP04118 112 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 DCNP07585 359 aaKnown RBP10.59□□□□□ -0.71
UBR4-207ENST00000425413 SDHBP21912 280 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 SLC2A5P22732 501 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 HTR3AP46098 478 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 CFHR1Q03591 330 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 NSDHLQ15738 373 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 ATAD3CQ5T2N8 411 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 TRIQKQ629K1 86 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 VASH1Q7L8A9 365 aaPredicted RBP10.59□□□□□ -0.71
UBR4-207ENST00000425413 OR1L3Q8NH93 324 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 ZNF563Q8TA94 476 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 SNX33Q8WV41 574 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 HOXB13Q92826 284 aaPredicted RBP10.59□□□□□ -0.71
UBR4-207ENST00000425413 PDCD1LG2Q9BQ51 273 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 LANCL2Q9NS86 450 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 RASD1Q9Y272 281 aa10.59□□□□□ -0.71
UBR4-207ENST00000425413 ASCC3Q8N3C0 2202 aaKnown RBP10.58□□□□□ -0.71
UBR4-207ENST00000425413 A0A087WUJ7 227 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 A0A087WV48 116 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 UTS2O95399 124 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 ELK1P19419 428 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 RPS27P42677 84 aaKnown RBP10.58□□□□□ -0.72
UBR4-207ENST00000425413 GPR143P51810 404 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 NR0B1P51843 470 aaKnown RBP10.58□□□□□ -0.72
UBR4-207ENST00000425413 RAB25P57735 213 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 PPP3R1P63098 170 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 IGLV3-21P80748 117 aaPredicted RBP10.58□□□□□ -0.72
UBR4-207ENST00000425413 COL19A1Q14993 1142 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 SLC25A35Q3KQZ1 300 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 TCTE1Q5JU00 501 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 C16orf47Q6ZP98 133 aaPredicted RBP10.58□□□□□ -0.72
UBR4-207ENST00000425413 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.58□□□□□ -0.72
UBR4-207ENST00000425413 UBQLNLQ8IYU4 475 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 SAMD12Q8N8I0 201 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 ZNF511Q8NB15 262 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 ABHD4Q8TB40 342 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 THAP3Q8WTV1 239 aaPredicted RBP10.58□□□□□ -0.72
UBR4-207ENST00000425413 DPYSL5Q9BPU6 564 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 RPRD1BQ9NQG5 326 aaKnown RBP10.58□□□□□ -0.72
UBR4-207ENST00000425413 CHRNA9Q9UGM1 479 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 IGKV1D-42A0A075B6H8 117 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 A0A0G2JMP0 313 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 A0A0X1KG70 313 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 SCDO00767 359 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 PLA2G10O15496 165 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 HCRTR2O43614 444 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 ICOSLGO75144 302 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 RBM34P42696 430 aaKnown RBP10.58□□□□□ -0.72
UBR4-207ENST00000425413 SLC37A1P57057 533 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 NXPH1P58417 271 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 IFITM2Q01629 132 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 TOMM34Q15785 309 aaPredicted RBP10.58□□□□□ -0.72
UBR4-207ENST00000425413 ACSM3Q53FZ2 586 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 LEG1Q6P5S2 330 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 ASB18Q6ZVZ8 466 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 SLC35F3Q8IY50 421 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 ZNF687Q8N1G0 1237 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 ZSCAN1Q8NBB4 408 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 C19orf18Q8NEA5 215 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 OR4M2Q8NGB6 313 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 FOXN4Q96NZ1 517 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 SYNDIG1Q9H7V2 258 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 ACOXLQ9NUZ1 547 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 EXTL2Q9UBQ6 330 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 COPS3Q9UNS2 423 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 N6AMT1Q9Y5N5 214 aa10.58□□□□□ -0.72
UBR4-207ENST00000425413 PIAS2O75928 621 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 RPP14O95059 124 aaKnown RBP10.57□□□□□ -0.72
UBR4-207ENST00000425413 UBL4AP11441 157 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 PSKH1P11801 424 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 INPP1P49441 399 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 DMWDQ09019 674 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 PON3Q15166 354 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.57□□□□□ -0.725e-7■■■□□ 18.1
UBR4-207ENST00000425413 TBRG1Q3YBR2 411 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 KLHL26Q53HC5 615 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 C1QL3Q5VWW1 255 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 ZNF57Q68EA5 555 aaPredicted RBP10.57□□□□□ -0.72
UBR4-207ENST00000425413 TSSK4Q6SA08 328 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 MARCH3Q86UD3 253 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 GPR135Q8IZ08 494 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 SLC2A12Q8TD20 617 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 TTYH2Q9BSA4 534 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 WACQ9BTA9 647 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 NUDT9Q9BW91 350 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 KCNN2Q9H2S1 579 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 SRA1Q9HD15 236 aaKnown RBP10.57□□□□□ -0.72
UBR4-207ENST00000425413 UBQLN4Q9NRR5 601 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 PRODH2Q9UF12 536 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 GMEB2Q9UKD1 530 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 MKL2Q9ULH7 1088 aa10.57□□□□□ -0.72
UBR4-207ENST00000425413 MRPS7Q9Y2R9 242 aaKnown RBP10.57□□□□□ -0.72
UBR4-207ENST00000425413 MEIOCA2RUB1 952 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms