RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 SGK2Q9HBY8 427 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 SIRT3Q9NTG7 399 aaPredicted RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 TMEM45AQ9NWC5 275 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 LYARQ9NX58 379 aaKnown RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 P4HTMQ9NXG6 502 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 SLC25A37Q9NYZ2 338 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 TMEM56-RWDD3S4R434 201 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 TRAV34A0A0B4J273 112 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 C7orf72A4D263 438 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 MAGEB17A8MXT2 336 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 PPIHO43447 177 aaKnown RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 LATO43561 262 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 SRPX2O60687 465 aaPredicted RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 SAP30O75446 220 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 CYP7B1O75881 506 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 GLCEO94923 617 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 MT-ND1P03886 318 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 FGF2P09038 288 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 FOSL2P15408 326 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 HRH2P25021 359 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 RPL10P27635 214 aaKnown RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 APEX1P27695 318 aaKnown RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 LTBRP36941 435 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 CD200P41217 278 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 HLCSP50747 726 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 PLA2G16P53816 162 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 EEFSECP57772 596 aaKnown RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 ARF3P61204 181 aaPredicted RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 TBPL1P62380 186 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 ARF1P84077 181 aaKnown RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 CDK3Q00526 305 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 NRF1Q16656 503 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 TATDN3Q17R31 274 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 ZNF630Q2M218 657 aaPredicted RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 KLHL22Q53GT1 634 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 MTX3Q5HYI7 312 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 AVPI1Q5T686 147 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 ADAMTSL4Q6UY14 1074 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 ZNF517Q6ZMY9 492 aaPredicted RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 SLCO4C1Q6ZQN7 724 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 KMT5CQ86Y97 462 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 YIPF7Q8N8F6 280 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 OR7A2PQ8NGA2 310 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 OR4A15Q8NGL6 344 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 STK35Q8TDR2 534 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 FAM222BQ8WU58 562 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 KAT2AQ92830 837 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 AURKBQ96GD4 344 aaPredicted RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 SLC41A2Q96JW4 573 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 PANX1Q96RD7 426 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 SIGLEC11Q96RL6 698 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 ELF4Q99607 663 aaPredicted RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 C1QTNF6Q9BXI9 259 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 SMURF1Q9HCE7 757 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 NGBQ9NPG2 151 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 ASIC5Q9NY37 505 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 VPS29Q9UBQ0 182 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 PEF1Q9UBV8 284 aaKnown RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 NUFIP1Q9UHK0 495 aaKnown RBP7.89□□□□□ -1.15
VPS8-204ENST00000424463 TNFRSF18Q9Y5U5 241 aa7.89□□□□□ -1.15
VPS8-204ENST00000424463 DNAH14Q0VDD8 3507 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 ZFC3H1O60293 1989 aaKnown RBP7.88□□□□□ -1.15
VPS8-204ENST00000424463 DHRS12A0PJE2 317 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 EREGO14944 169 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 KHDRBS3O75525 346 aaKnown RBP7.88□□□□□ -1.15
VPS8-204ENST00000424463 EGFP01133 1207 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 IFNA7P01567 189 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 ARAFP10398 606 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 FOLR2P14207 255 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 CCNOP22674 350 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 C21orf33P30042 268 aaPredicted RBP7.88□□□□□ -1.15
VPS8-204ENST00000424463 EVX1P49640 407 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 COMPP49747 757 aaPredicted RBP7.88□□□□□ -1.15
VPS8-204ENST00000424463 IDH3GP51553 393 aaPredicted RBP7.88□□□□□ -1.15
VPS8-204ENST00000424463 CCR8P51685 355 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 RAB2AP61019 212 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 SORDQ00796 357 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 BIKQ13323 160 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 CYP51A1Q16850 503 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 TMEM196Q5HYL7 178 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 TBCELQ5QJ74 424 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 SYT6Q5T7P8 510 aaPredicted RBP7.88□□□□□ -1.15
VPS8-204ENST00000424463 IER5LQ5T953 404 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 ABLIM2Q6H8Q1 611 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 LCN8Q6JVE9 175 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 TMPRSS11BQ86T26 416 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 PHACTR4Q8IZ21 702 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 MFSD9Q8NBP5 474 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 ZBTB34Q8NCN2 500 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 BPIFB6Q8NFQ5 453 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 CPNE2Q96FN4 548 aaPredicted RBP7.88□□□□□ -1.15
VPS8-204ENST00000424463 LINC00615Q96LM1 132 aaPredicted RBP7.88□□□□□ -1.15
VPS8-204ENST00000424463 FER1L6-AS2Q96M78 137 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 ZNF583Q96ND8 569 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 MYOCQ99972 504 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 SLCO5A1Q9H2Y9 848 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 TMEM38AQ9H6F2 299 aa7.88□□□□□ -1.15
VPS8-204ENST00000424463 PNO1Q9NRX1 252 aaKnown RBP7.88□□□□□ -1.15
VPS8-204ENST00000424463 PLEK2Q9NYT0 353 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms