RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PNMTP11086 282 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 FPR1P21462 350 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 GTF2E2P29084 291 aaKnown RBP9.73□□□□□ -0.85
USP49-204ENST00000423567 PCGF2P35227 344 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 HOXC5Q00444 222 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 ABLIM2Q6H8Q1 611 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 ERICH5Q6P6B1 374 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 TFAP2EQ6VUC0 442 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 NUFIP2Q7Z417 695 aaKnown RBP9.73□□□□□ -0.85
USP49-204ENST00000423567 NET1Q7Z628 596 aaPredicted RBP9.73□□□□□ -0.85
USP49-204ENST00000423567 CPLX4Q7Z7G2 160 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 PTOV1Q86YD1 416 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 SMYD1Q8NB12 490 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 STEAP2Q8NFT2 490 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 RP9Q8TA86 221 aaKnown RBP9.73□□□□□ -0.85
USP49-204ENST00000423567 RNF217Q8TC41 542 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 RASSF5Q8WWW0 418 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 C3orf49Q96BT1 292 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 WFIKKN1Q96NZ8 548 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 ELAC2Q9BQ52 826 aaKnown RBP9.73□□□□□ -0.85
USP49-204ENST00000423567 HDHD5Q9BXW7 423 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 C12orf10Q9HB07 376 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 ARMCX1Q9P291 453 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 GPR52Q9Y2T5 361 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 NOSIPQ9Y314 301 aaKnown RBP9.73□□□□□ -0.85
USP49-204ENST00000423567 MED12LQ86YW9 2145 aa9.73□□□□□ -0.85
USP49-204ENST00000423567 ANKHD1Q8IWZ3 2542 aaKnown RBP9.73□□□□□ -0.85
USP49-204ENST00000423567 IGKV3D-15A0A087WSY6 115 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 ZC3H12DA2A288 527 aaKnown RBP9.72□□□□□ -0.85
USP49-204ENST00000423567 M0QX08 132 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 TPST1O60507 370 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 MFN2O95140 757 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 IFNA14P01570 189 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 C8BP07358 591 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 IMPDH2P12268 514 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 IL32P24001 234 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 OR3A2P47893 321 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 SEC24CP53992 1094 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 PCBP3P57721 371 aaKnown RBP9.72□□□□□ -0.85
USP49-204ENST00000423567 DMTNQ08495 405 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 BNIP2Q12982 314 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 CEACAM7Q14002 265 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 P2RY6Q15077 328 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 OR7A5Q15622 319 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 VMACQ2NL98 169 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 RABL3Q5HYI8 236 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 ALG10BQ5I7T1 473 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 C1orf140Q5VVS0 124 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 ULK3Q6PHR2 472 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 PAQR6Q6TCH4 344 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 C5orf46Q6UWT4 87 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 ARPINQ7Z6K5 226 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 ATG4DQ86TL0 474 aaPredicted RBP9.72□□□□□ -0.85
USP49-204ENST00000423567 UBE2J2Q8N2K1 259 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 LSMEM1Q8N8F7 131 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 STK35Q8TDR2 534 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 APH1AQ96BI3 265 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 ZNF775Q96BV0 537 aaPredicted RBP9.72□□□□□ -0.85
USP49-204ENST00000423567 RCN3Q96D15 328 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 ZC3HAV1LQ96H79 300 aaKnown RBP9.72□□□□□ -0.85
USP49-204ENST00000423567 ZNF300Q96RE9 604 aaPredicted RBP9.72□□□□□ -0.85
USP49-204ENST00000423567 OR10A4Q9H209 315 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 PIF1Q9H611 641 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 PARPBPQ9NWS1 579 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 ADPRHL2Q9NX46 363 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 AP3M1Q9Y2T2 418 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 ITPR2Q14571 2701 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 HEATR5AQ86XA9 2040 aa9.72□□□□□ -0.85
USP49-204ENST00000423567 ABCA12Q86UK0 2595 aa9.71□□□□□ -0.85
USP49-204ENST00000423567 A0A1B0GWA3 101 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 FAM221AA4D161 298 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 GMNCA6NCL1 334 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 LIPT2A6NK58 231 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 ZNF716A6NP11 495 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 FXYD1O00168 92 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 DYNC1I1O14576 645 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 OR2T1O43869 369 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 MRPL33O75394 65 aaKnown RBP9.71□□□□□ -0.86
USP49-204ENST00000423567 VAMP5O95183 116 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 CNOT4O95628 575 aaKnown RBP9.71□□□□□ -0.86
USP49-204ENST00000423567 ADAP00813 363 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 OPN1SWP03999 348 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 COX4I1P13073 169 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 KLK2P20151 261 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 PSMB1P20618 241 aaKnown RBP9.71□□□□□ -0.86
USP49-204ENST00000423567 CRYGSP22914 178 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 CCKARP32238 428 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 LSP1P33241 339 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 SMCPP49901 116 aaPredicted RBP9.71□□□□□ -0.86
USP49-204ENST00000423567 SLC16A1P53985 500 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 GNGT1P63211 74 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 H3F3AP84243 136 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 POU4F3Q15319 338 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 GLIPR1L2Q4G1C9 344 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 OTUD3Q5T2D3 398 aaPredicted RBP9.71□□□□□ -0.86
USP49-204ENST00000423567 FAM91A1Q658Y4 838 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 ANKRD34AQ69YU3 496 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 TMEM225Q6GV28 225 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 STAC2Q6ZMT1 411 aa9.71□□□□□ -0.86
USP49-204ENST00000423567 Q6ZT83 130 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms