RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ASAH2BP0C7U1 165 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 FOLR1P15328 257 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 HTR3AP46098 478 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 DIO1P49895 249 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 PLCXD2Q0VAA5 305 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 CBFBQ13951 182 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 CDONQ4KMG0 1287 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 HBMQ6B0K9 141 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 PRR23CQ6ZRP0 262 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ZNF441Q8N8Z8 693 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 OR4D9Q8NGE8 314 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 OR52E2Q8NGJ4 325 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 OR5M3Q8NGP4 307 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 DIRAS2Q96HU8 199 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 QPCTLQ9NXS2 382 aa13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 DHCR7Q9UBM7 475 aaKnown RBP13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 PPIEQ9UNP9 301 aaKnown RBP13.3□□□□□ -0.28
HLA-DPA1-242ENST00000419277 IGKV1D-42A0A075B6H8 117 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 HYAL3O43820 417 aaPredicted RBP13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 DLGAP3O95886 979 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 HLA-DQB1P01920 261 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 HIST1H1CP16403 213 aaKnown RBP13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 UQCRC1P31930 480 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 GBX2P52951 348 aaPredicted RBP13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SUMO3P55854 103 aaPredicted RBP13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SLC26A5P58743 744 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 CFHR1Q03591 330 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 MXD1Q05195 221 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ASAH1Q13510 395 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SLC6A19Q695T7 634 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 DMKNQ6E0U4 476 aaPredicted RBP13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 FAAH2Q6GMR7 532 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 FAM131AQ6UXB0 335 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 WDR5BQ86VZ2 330 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TMEM99Q8N816 258 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 OR6S1Q8NH40 331 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 OR8K3Q8NH51 312 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ZNF563Q8TA94 476 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 NUBPLQ8TB37 319 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 THRSPQ92748 146 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TSLPQ969D9 159 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 CCDC74AQ96AQ1 378 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SMIM19Q96E16 107 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 UBL7Q96S82 380 aaPredicted RBP13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 HCAR1Q9BXC0 346 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TBL1XR1Q9BZK7 514 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SEMA4CQ9C0C4 833 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SLC7A5P2Q9GIP4 190 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 VN1R1Q9GZP7 353 aa13.29□□□□□ -0.28
HLA-DPA1-242ENST00000419277 UNC13CQ8NB66 2214 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 A0A1B0GTQ1 180 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 C19orf67A6NJJ6 358 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 MCIDASD6RGH6 385 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 NDUFB5O43674 189 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TRIM3O75382 744 aaPredicted RBP13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 REM1O75628 298 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 GLCEO94923 617 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 NAGAP17050 411 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TGM4P49221 684 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 CCR4P51679 360 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 MAP2K6P52564 334 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 BLVRAP53004 296 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 CD226Q15762 336 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ZNF79Q15937 498 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ALG10Q5BKT4 473 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 PMS2CLQ68D20 193 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 RPL22L1Q6P5R6 122 aaKnown RBP13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 KANSL1Q7Z3B3 1105 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 PXKQ7Z7A4 578 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 JAZF1Q86VZ6 243 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 C9orf40Q8IXQ3 194 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 NPEPL1Q8NDH3 523 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SDR9C7Q8NEX9 313 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ARSGQ96EG1 525 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 C4orf36Q96KX1 117 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 GAL3ST4Q96RP7 486 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SDHCQ99643 169 aaPredicted RBP13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TIMP4Q99727 224 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 MED20Q9H944 212 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ABCB9Q9NP78 766 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 MKL2Q9ULH7 1088 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 YARS2Q9Y2Z4 477 aaKnown RBP13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 IER3IP1Q9Y5U9 82 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 NPFFR2Q9Y5X5 522 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SEC16AO15027 2179 aa13.28□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TRAV1-2A0A0B4J238 106 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 PHYHO14832 338 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 OGG1O15527 345 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 HIST1H2ABP04908 130 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 CD79BP40259 229 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 ZNF85Q03923 595 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TMEM91Q6ZNR0 172 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 HIST3H2AQ7L7L0 130 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 NANOGNBQ7Z5D8 188 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 LRRC28Q86X40 367 aaPredicted RBP13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 SLC35F2Q8IXU6 374 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 OR8H2Q8N162 312 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 OR4K13Q8NH42 304 aa13.27□□□□□ -0.28
HLA-DPA1-242ENST00000419277 TMEM234Q8WY98 164 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms