RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 MAPK11Q15759 364 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 DUSP7Q16829 419 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 IMPG1Q17R60 797 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 MRGPRG-AS1Q2M3A8 158 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 CTU2Q2VPK5 515 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 ADPRMQ3LIE5 342 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 TTLL9Q3SXZ7 439 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 XKR4Q5GH76 650 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 SLC25A53Q5H9E4 307 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ARMCX4Q5H9R4 360 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 PAGE3Q5JUK9 113 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 C6orf136Q5SQH8 315 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 LDLRAP1Q5SW96 308 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 TPRG1LQ5T0D9 272 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 C6orf183Q5T699 404 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 LCN1P1Q5VSP4 162 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 TIGD3Q6B0B8 471 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 KDM4DQ6B0I6 523 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 CLEC6AQ6EIG7 209 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 OR4A47Q6IF82 309 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ERICH5Q6P6B1 374 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 PSRC1Q6PGN9 363 aaPredicted RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 TBPL2Q6SJ96 375 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 SPESP1Q6UW49 350 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 KDELC1Q6UW63 502 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 CCBE1Q6UXH8 406 aaPredicted RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 ALKAL1Q6UXT8 129 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 DLEU7Q6UYE1 221 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 GDPGP1Q6ZNW5 385 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 FAM92BQ6ZTR7 304 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 CLEC20AQ6ZU45 233 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 GPRIN3Q6ZVF9 776 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ZNF767PQ75MW2 155 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ERN2Q76MJ5 926 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 PAGE2Q7Z2X7 111 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 NOTCH2NLQ7Z3S9 236 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 SNX20Q7Z614 316 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 IFNEQ86WN2 208 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 TRIM69Q86WT6 500 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 RAB43Q86YS6 212 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 PLCZ1Q86YW0 608 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 APOBEC3FQ8IUX4 373 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 IQCF2Q8IXL9 164 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 CPNE9Q8IYJ1 553 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 NPWQ8N729 165 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 RASGEF1AQ8N9B8 481 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 WDSUB1Q8N9V3 476 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 FNDC5Q8NAU1 212 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ADAD2Q8NCV1 583 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 ZNF540Q8NDQ6 660 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 OR10Q1Q8NGQ4 319 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 OR6F1Q8NGZ6 308 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 NDNFQ8TB73 568 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 SUN5Q8TC36 379 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 HCAR2Q8TDS4 363 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 MRGPRDQ8TDS7 321 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 KCNE4Q8WWG9 221 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 SLC13A3Q8WWT9 602 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 RPL3LQ92901 407 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 FAM162AQ96A26 154 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 KIAA1143Q96AT1 154 aaPredicted RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 DCPSQ96C86 337 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 SIPA1Q96FS4 1042 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 IMP4Q96G21 291 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 GMPPAQ96IJ6 420 aaPredicted RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 PRAC1Q96KF2 57 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 CEP19Q96LK0 163 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 FER1L6-AS2Q96M78 137 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 SPATA33Q96N06 139 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 COL21A1Q96P44 957 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 TRIB3Q96RU7 358 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ATOH8Q96SQ7 321 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ZNF382Q96SR6 550 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 PITX2Q99697 317 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ASCL2Q99929 193 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 APOL2Q9BQE5 337 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 SLC39A3Q9BRY0 314 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 MED10Q9BTT4 135 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ULBP1Q9BZM6 244 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 C6orf62Q9GZU0 229 aaPredicted RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 SHARPINQ9H0F6 387 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 TUBB1Q9H4B7 451 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 NXF3Q9H4D5 531 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 MINDY3Q9H8M7 445 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 Q9H8V8 135 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 FGF22Q9HCT0 170 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 DNAJC4Q9NNZ3 241 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ACOT13Q9NPJ3 140 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 DYRK4Q9NR20 520 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 GSN-AS1Q9NRJ2 163 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ABCB10Q9NRK6 738 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 DDX28Q9NUL7 540 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 DCAF13Q9NV06 445 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 DDIT4Q9NX09 232 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 MRPL39Q9NYK5 338 aaKnown RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 NUDT4Q9NZJ9 180 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 C19orf25Q9UFG5 118 aaPredicted RBP2.33□□□□□ -2.04
VPS41-206ENST00000418457 GIMAP2Q9UG22 337 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 PHF11Q9UIL8 331 aa2.33□□□□□ -2.04
VPS41-206ENST00000418457 ERRFI1Q9UJM3 462 aaPredicted RBP2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms