RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 IDUAP35475 653 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 ASCL1P50553 236 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 CTBP2P56545 445 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 OR2B6P58173 313 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 SELENOWP63302 87 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 SIRPAP78324 504 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 SLC35A1P78382 337 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 SPATS1Q496A3 300 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 SWT1Q5T5J6 900 aaKnown RBP11.92□□□□□ -0.5
TMEM248-203ENST00000418375 ZNF613Q6PF04 617 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 C5orf46Q6UWT4 87 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 CARM1Q86X55 608 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 RELL2Q8NC24 303 aaPredicted RBP11.92□□□□□ -0.5
TMEM248-203ENST00000418375 RNF128Q8TEB7 428 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 WFDC6Q9BQY6 131 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 TACO1Q9BSH4 297 aaKnown RBP11.92□□□□□ -0.5
TMEM248-203ENST00000418375 PRR14Q9BWN1 585 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 TAPBPLQ9BX59 468 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 MCCC2Q9HCC0 563 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 GP6Q9HCN6 339 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 PACSIN3Q9UKS6 424 aa11.92□□□□□ -0.5
TMEM248-203ENST00000418375 ARHGAP21Q5T5U3 1957 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 A0A0B4J2E0 115 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 A0A1B0GX12 115 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 ZC3H12DA2A288 527 aaKnown RBP11.91□□□□□ -0.5
TMEM248-203ENST00000418375 CPSF4LA6NMK7 179 aaKnown RBP11.91□□□□□ -0.5
TMEM248-203ENST00000418375 TMEM229AB2RXF0 380 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 TPST2O60704 377 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 EIF1BO60739 113 aaKnown RBP11.91□□□□□ -0.5
TMEM248-203ENST00000418375 SS18L1O75177 396 aaPredicted RBP11.91□□□□□ -0.5
TMEM248-203ENST00000418375 TNFSF13O75888 250 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 AHSA1O95433 338 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 ZNF682O95780 498 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 GPIP06744 558 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 HSD17B1P14061 328 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 IGFBP2P18065 325 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 KIR2DL2P43627 348 aaPredicted RBP11.91□□□□□ -0.5
TMEM248-203ENST00000418375 KRTAP10-9P60411 292 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 TFF3Q07654 80 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 BNIP2Q12982 314 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 NPTX1Q15818 432 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 ENTPD8Q5MY95 495 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 TMEM201Q5SNT2 666 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 C1orf140Q5VVS0 124 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 GLYATQ6IB77 296 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 FAM214BQ7L5A3 538 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 RNF148Q8N7C7 305 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 RBM15BQ8NDT2 890 aaKnown RBP11.91□□□□□ -0.5
TMEM248-203ENST00000418375 OR4D11Q8NGI4 311 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 ABHD3Q8WU67 409 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 SLC38A4Q969I6 547 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 DNAJA3Q96EY1 480 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 NAA11Q9BSU3 229 aaPredicted RBP11.91□□□□□ -0.5
TMEM248-203ENST00000418375 PCDHAC1Q9H158 963 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 NPDC1Q9NQX5 325 aaPredicted RBP11.91□□□□□ -0.5
TMEM248-203ENST00000418375 KLHL9Q9P2J3 617 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 EGFL7Q9UHF1 273 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 MAGEL2Q9UJ55 1249 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 RPS6KA6Q9UK32 745 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 ITGB1BP2Q9UKP3 347 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 CLEC4AQ9UMR7 237 aa11.91□□□□□ -0.5
TMEM248-203ENST00000418375 CACNA1CQ13936 2221 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 A0A087WUJ7 227 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 IGHV3-15A0A0B4J1V0 119 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 TRAPPC13A5PLN9 417 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 SMAD9O15198 467 aaKnown RBP11.9□□□□□ -0.5
TMEM248-203ENST00000418375 CHP2O43745 196 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 CYTIPO60759 359 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 NPIPB7O75200 414 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 SMNDC1O75940 238 aaKnown RBP eCLIP11.9□□□□□ -0.5
TMEM248-203ENST00000418375 TACC2O95359 2948 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 SERPINA1P01009 418 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 T-ENOLP0DO92 83 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 IMPDH2P12268 514 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 NCK1P16333 377 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 TCN1P20061 433 aaPredicted RBP11.9□□□□□ -0.5
TMEM248-203ENST00000418375 FPR1P21462 350 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 IFNA8P32881 189 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 CPOXP36551 454 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 CDH12P55289 794 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 RASGEF1BQ0VAM2 473 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 CEACAM7Q14002 265 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 GUSBP1Q15486 140 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 FBXL19-AS1Q494R0 122 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 FKBP9P1Q75LS8 142 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 CBLL1Q75N03 491 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 RBM45Q8IUH3 476 aaKnown RBP11.9□□□□□ -0.5
TMEM248-203ENST00000418375 ARHGAP24Q8N264 748 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 OR6K3Q8NGY3 331 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 PIGXQ8TBF5 258 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 GEMIN6Q8WXD5 167 aaKnown RBP11.9□□□□□ -0.5
TMEM248-203ENST00000418375 RNASE6Q93091 150 aaKnown RBP11.9□□□□□ -0.5
TMEM248-203ENST00000418375 STARD4Q96DR4 205 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 EPYCQ99645 322 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 POLR2J2Q9GZM3 115 aaKnown RBP11.9□□□□□ -0.5
TMEM248-203ENST00000418375 POLR2J3Q9H1A7 115 aaKnown RBP11.9□□□□□ -0.5
TMEM248-203ENST00000418375 KLHL13Q9P2N7 655 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 CD300AQ9UGN4 299 aa11.9□□□□□ -0.5
TMEM248-203ENST00000418375 FOXD3Q9UJU5 478 aaPredicted RBP11.9□□□□□ -0.5
TMEM248-203ENST00000418375 PROCRQ9UNN8 238 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms