RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 ZNF845Q96IR2 970 aaPredicted RBP15.97■□□□□ 0.15
VCP-202ENST00000417448 ZNF583Q96ND8 569 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 LRRC37BQ96QE4 947 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 WFDC6Q9BQY6 131 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 TMEM204Q9BSN7 226 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 SLCO5A1Q9H2Y9 848 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 EFCAB1Q9HAE3 211 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 ZNF232Q9UNY5 417 aa15.97■□□□□ 0.15
VCP-202ENST00000417448 GPC6Q9Y625 555 aaPredicted RBP15.97■□□□□ 0.15
VCP-202ENST00000417448 CDHR4A6H8M9 788 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 M0QX08 132 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 EIF1AYO14602 144 aaKnown RBP15.96■□□□□ 0.15
VCP-202ENST00000417448 IDUAP35475 653 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 RPS4XP62701 263 aaKnown RBP15.96■□□□□ 0.15
VCP-202ENST00000417448 MERTKQ12866 999 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 LARS2Q15031 903 aaKnown RBP15.96■□□□□ 0.15
VCP-202ENST00000417448 LIN52Q52LA3 116 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 OR2A2Q6IF42 318 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 P4HA3Q7Z4N8 544 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 NET1Q7Z628 596 aaPredicted RBP15.96■□□□□ 0.15
VCP-202ENST00000417448 SERPINA11Q86U17 422 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 GGNQ86UU5 652 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 SLC15A3Q8IY34 581 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 CCDC197Q8NCU1 140 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 HIPK4Q8NE63 616 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 OR8J3Q8NGG0 315 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 FIG4Q92562 907 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 ZBTB8AQ96BR9 441 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 DTNBP1Q96EV8 351 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 PLPPR2Q96GM1 343 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 SPATA9Q9BWV2 254 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 KLHL4Q9C0H6 718 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 ANGPT4Q9Y264 503 aa15.96■□□□□ 0.15
VCP-202ENST00000417448 A0A0J9YW62 118 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 SLC22A20A6NK97 555 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 NME4O00746 187 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 DCTN3O75935 186 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 NPPAP01160 153 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 SOD3P08294 240 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 CD8BP10966 210 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 PGCP20142 388 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 CDKN1AP38936 164 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 ACAA2P42765 397 aaKnown RBP15.95■□□□□ 0.14
VCP-202ENST00000417448 SLC7A2P52569 658 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 SUMO3P55854 103 aaPredicted RBP15.95■□□□□ 0.14
VCP-202ENST00000417448 EPS8Q12929 822 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 VMACQ2NL98 169 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 PRAMEF8Q5VWM4 474 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 PRAMEF7Q5VXH5 474 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 PPP4R4Q6NUP7 873 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 LILRA2Q8N149 483 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 AKAP1Q92667 903 aaKnown RBP eCLIP15.95■□□□□ 0.14
VCP-202ENST00000417448 PMM1Q92871 262 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 CMTM5Q96DZ9 223 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 CTPS2Q9NRF8 586 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 CDC42EP3Q9UKI2 254 aa15.95■□□□□ 0.14
VCP-202ENST00000417448 TNFSF11O14788 317 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 DNAJA2O60884 412 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 NDUFS7O75251 213 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 NTN1O95631 604 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 IGHV4-39P01824 125 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 THBS1P07996 1170 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 ETS2P15036 469 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 ZNF17P17021 662 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 PRDX6P30041 224 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 PCGF2P35227 344 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 PCBP3P57721 371 aaKnown RBP15.94■□□□□ 0.14
VCP-202ENST00000417448 PSME3P61289 254 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 LIPEQ05469 1076 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 TMEM176BQ3YBM2 270 aaPredicted RBP15.94■□□□□ 0.14
VCP-202ENST00000417448 C8orf82Q6P1X6 216 aaPredicted RBP15.94■□□□□ 0.14
VCP-202ENST00000417448 ARMC8Q8IUR7 673 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 CMIPQ8IY22 773 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 CADM2Q8N3J6 435 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 ANKS4BQ8N8V4 417 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 LILRB1Q8NHL6 650 aaPredicted RBP15.94■□□□□ 0.14
VCP-202ENST00000417448 BCAS4Q8TDM0 211 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 SH3GL1Q99961 368 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 PINK1Q9BXM7 581 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 CACYBPQ9HB71 228 aaKnown RBP15.94■□□□□ 0.14
VCP-202ENST00000417448 HHATLQ9HCP6 504 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 ACER3Q9NUN7 267 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 IFT52Q9Y366 437 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 AP4B1Q9Y6B7 739 aa15.94■□□□□ 0.14
VCP-202ENST00000417448 ALPK2Q86TB3 2170 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 TENM1Q9UKZ4 2725 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 A0A096LNT2 108 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 A0A1W2PNR3 127 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 C7orf72A4D263 438 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 CFAP73A6NFT4 308 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 NDUFAB1O14561 156 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 CXCL13O43927 109 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 MFN2O95140 757 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 DANCRP0C864 163 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 EIF1AXP47813 144 aaKnown RBP15.93■□□□□ 0.14
VCP-202ENST00000417448 CRYBA2P53672 197 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 RAC1P63000 192 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 SLC25A3Q00325 362 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 RBBP4Q09028 425 aa15.93■□□□□ 0.14
VCP-202ENST00000417448 GUSBP1Q15486 140 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms