RNA–Protein interactions for RNA: ENST00000416115.1

SDCBP2P1-201, Transcript of syndecan binding protein 2 pseudogene 1, humanhuman

BASIC

Gene SDCBP2P1, Length 614 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2P1-201ENST00000416115 Q9UFV3 132 aa11.98□□□□□ -0.49
SDCBP2P1-201ENST00000416115 RNF6Q9Y252 685 aa11.98□□□□□ -0.49
SDCBP2P1-201ENST00000416115 KLF2Q9Y5W3 355 aaPredicted RBP11.98□□□□□ -0.49
SDCBP2P1-201ENST00000416115 TRAV36DV7A0A075B6V5 113 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 CPSF4LA6NMK7 179 aaKnown RBP11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 TOXO94900 526 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 TGM6O95932 706 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 PLGP00747 810 aaPredicted RBP11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 CCNA2P20248 432 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 RBM34P42696 430 aaKnown RBP11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 OR1E2P47887 323 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 OR2B6P58173 313 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 CBX1P83916 185 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 ST3GAL3Q11203 375 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 PDK3Q15120 406 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 FAM69AQ5T7M9 428 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 LCN8Q6JVE9 175 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 PPP4R4Q6NUP7 873 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 PAQR6Q6TCH4 344 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 LINC00114Q6XXX2 140 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 DEF8Q6ZN54 512 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 CCDC121Q6ZUS5 278 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 VTCN1Q7Z7D3 282 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 RBM45Q8IUH3 476 aaKnown RBP11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 C9orf106Q8NAJ2 232 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 OR4D11Q8NGI4 311 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 PIGXQ8TBF5 258 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 RNF217Q8TC41 542 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 RNF128Q8TEB7 428 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 MCUR1Q96AQ8 359 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 SLC41A3Q96GZ6 507 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 ARL5BQ96KC2 179 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 PRRC1Q96M27 445 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 HS6ST2Q96MM7 605 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 DOCK7Q96N67 2140 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 WFDC6Q9BQY6 131 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 KLHL4Q9C0H6 718 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 OR11A1Q9GZK7 315 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 PIGMQ9H3S5 423 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 KCNJ16Q9NPI9 418 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 RIMS3Q9UJD0 308 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 PACSIN3Q9UKS6 424 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 EMC9Q9Y3B6 208 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 FAM32AQ9Y421 112 aaKnown RBP11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 SPTAN1Q13813 2472 aaKnown RBP11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 COL12A1Q99715 3063 aa11.97□□□□□ -0.49
SDCBP2P1-201ENST00000416115 USP9YO00507 2555 aaPredicted RBP11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 LIPT2A6NK58 231 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 GPR171O14626 319 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 CYTIPO60759 359 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 VAMP5O95183 116 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 IGF2P01344 180 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 RHCEP18577 417 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 GTF2E2P29084 291 aaKnown RBP11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 CTBP2P56545 445 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 H3F3AP84243 136 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 TTC33Q6PID6 262 aaPredicted RBP11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 FAM214BQ7L5A3 538 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 MAMDC2Q7Z304 686 aaPredicted RBP11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 INTS12Q96CB8 462 aaKnown RBP11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 LRGUKQ96M69 825 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 PRR14Q9BWN1 585 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 SRXN1Q9BYN0 137 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 ANKRD19PQ9H560 264 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 EMC3Q9P0I2 261 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 FOXD3Q9UJU5 478 aaPredicted RBP11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 SLC7A7Q9UM01 511 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 CORINQ9Y5Q5 1042 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 ENPP4Q9Y6X5 453 aa11.96□□□□□ -0.49
SDCBP2P1-201ENST00000416115 MED12LQ86YW9 2145 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 A0A1W2PNV4 684 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 ZC3H12DA2A288 527 aaKnown RBP11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 GSC2O15499 205 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 FZD7O75084 574 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 SS18L1O75177 396 aaPredicted RBP11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 AQP8O94778 261 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 MT-ATP6P00846 226 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 IMPDH2P12268 514 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 TNFRSF1BP20333 461 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 FPR1P21462 350 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 MSX2P35548 267 aaPredicted RBP11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 SMIM11AP58511 58 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 EGR4Q05215 589 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 RASGEF1BQ0VAM2 473 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 TMEM201Q5SNT2 666 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 PGM2L1Q6PCE3 622 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 GDF7Q7Z4P5 450 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 CCDC71Q8IV32 467 aaPredicted RBP11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 OFCC1Q8IZS5 231 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 ZNF347Q96SE7 839 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 ZNF426Q9BUY5 554 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 FNDC11Q9BVV2 318 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 SF3B5Q9BWJ5 86 aaKnown RBP11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 AMBRA1Q9C0C7 1298 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 MAGIXQ9H6Y5 334 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 BCO1Q9HAY6 547 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 CHST11Q9NPF2 352 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 FANCFQ9NPI8 374 aa11.95□□□□□ -0.5
SDCBP2P1-201ENST00000416115 INTS1Q8N201 2190 aaKnown RBP11.94□□□□□ -0.5
SDCBP2P1-201ENST00000416115 IGKV3D-15A0A087WSY6 115 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms