RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 SPATA5L1Q9BVQ7 753 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 ANGPTL4Q9BY76 406 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 SDHAF3Q9NRP4 125 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 RASSF1Q9NS23 344 aa13.24□□□□□ -0.29
SGCE-202ENST00000415788 A0A075B6Q4 140 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 FADS1O60427 444 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 UGT2B17O75795 530 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 DBIP07108 87 aaKnown RBP13.23□□□□□ -0.29
SGCE-202ENST00000415788 KDELR2P33947 212 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 GGT2P36268 569 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 PCBP3P57721 371 aaKnown RBP13.23□□□□□ -0.29
SGCE-202ENST00000415788 KLHL26Q53HC5 615 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 PRAMEF20Q5VT98 475 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 POGLUT1Q8NBL1 392 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 FAM98AQ8NCA5 519 aaKnown RBP13.23□□□□□ -0.29
SGCE-202ENST00000415788 GRHL3Q8TE85 626 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 UBL7Q96S82 380 aaPredicted RBP13.23□□□□□ -0.29
SGCE-202ENST00000415788 FAM173AQ9BQD7 235 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 DOHHQ9BU89 302 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 ZNF71Q9NQZ8 489 aaPredicted RBP13.23□□□□□ -0.29
SGCE-202ENST00000415788 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.23□□□□□ -0.29
SGCE-202ENST00000415788 CSAG2Q9Y5P2 127 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 CENPXA8MT69 81 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 RPS4Y1P22090 263 aaKnown RBP13.23□□□□□ -0.29
SGCE-202ENST00000415788 SLC15A1P46059 708 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 CDK10Q15131 360 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 ZSWIM7Q19AV6 140 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 RPS26P11Q5JNZ5 115 aaPredicted RBP13.23□□□□□ -0.29
SGCE-202ENST00000415788 ATAD3CQ5T2N8 411 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 ZNF367Q7RTV3 350 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 CMIPQ8IY22 773 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 DEPDC4Q8N2C3 294 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 LSM14AQ8ND56 463 aaKnown RBP13.23□□□□□ -0.29
SGCE-202ENST00000415788 PNPLA2Q96AD5 504 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 NTNG2Q96CW9 530 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 TMEM41AQ96HV5 264 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 MARCH7Q9H992 704 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 FLRT3Q9NZU0 649 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 WIF1Q9Y5W5 379 aa13.23□□□□□ -0.29
SGCE-202ENST00000415788 hCG_2039718K7EN88 272 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 NDUFB5O43674 189 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 IFNA14P01570 189 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 THBS1P07996 1170 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 ADH7P40394 386 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 PTGDSP41222 190 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 VLDLRP98155 873 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 LAPTM4AQ15012 233 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 LARS2Q15031 903 aaKnown RBP13.22□□□□□ -0.29
SGCE-202ENST00000415788 ZFP69Q49AA0 526 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 PDZK1Q5T2W1 519 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 SLC6A19Q695T7 634 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 RPUSD3Q6P087 351 aaKnown RBP13.22□□□□□ -0.29
SGCE-202ENST00000415788 OLIG3Q7RTU3 272 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 GALNTL5Q7Z4T8 443 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 GGHQ92820 318 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 TRIM63Q969Q1 353 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 CEP19Q96LK0 163 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 FRMD6Q96NE9 622 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 SLA2Q9H6Q3 261 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 KLHL1Q9NR64 748 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 BOKQ9UMX3 212 aaPredicted RBP13.22□□□□□ -0.29
SGCE-202ENST00000415788 LHX6Q9UPM6 363 aa13.22□□□□□ -0.29
SGCE-202ENST00000415788 NPIPA5A0A0B4J1W7 369 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 NPIPA7E9PJI5 369 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 ALX3O95076 343 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 NPIPA8P0DM63 369 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 ELAVL4P26378 380 aaKnown RBP13.21□□□□□ -0.29
SGCE-202ENST00000415788 EPHA2P29317 976 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 AQP1P29972 269 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 RGS6P49758 472 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 MRPS15P82914 257 aaKnown RBP13.21□□□□□ -0.29
SGCE-202ENST00000415788 C17orf67Q0P5P2 114 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 SULF2Q8IWU5 870 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 CELF2-AS1Q8N7Q2 184 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 ZNF614Q8N883 585 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 TEX19Q8NA77 164 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 OR2M7Q8NG81 312 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 OR52P1PQ8NH57 321 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 GRPEL2Q8TAA5 225 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 HSH2DQ96JZ2 352 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 SLC30A2Q9BRI3 323 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 HES7Q9BYE0 225 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 QRSL1Q9H0R6 528 aaKnown RBP13.21□□□□□ -0.29
SGCE-202ENST00000415788 PROK2Q9HC23 129 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.21□□□□□ -0.29
SGCE-202ENST00000415788 DDX28Q9NUL7 540 aaKnown RBP13.21□□□□□ -0.29
SGCE-202ENST00000415788 KCNE5Q9UJ90 142 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 SLC35A3Q9Y2D2 325 aa13.21□□□□□ -0.29
SGCE-202ENST00000415788 SERINC4A6NH21 518 aa13.21□□□□□ -0.3
SGCE-202ENST00000415788 FAM25AB3EWG3 89 aa13.21□□□□□ -0.3
SGCE-202ENST00000415788 FAM25CB3EWG5 89 aa13.21□□□□□ -0.3
SGCE-202ENST00000415788 FAM25GB3EWG6 89 aa13.21□□□□□ -0.3
SGCE-202ENST00000415788 MFN2O95140 757 aa13.21□□□□□ -0.3
SGCE-202ENST00000415788 ADORA3P0DMS8 318 aa13.21□□□□□ -0.3
SGCE-202ENST00000415788 NID1P14543 1247 aa13.21□□□□□ -0.3
SGCE-202ENST00000415788 RPS5P46782 204 aaKnown RBP13.21□□□□□ -0.3
SGCE-202ENST00000415788 GAS1P54826 345 aa13.21□□□□□ -0.3
SGCE-202ENST00000415788 KCNJ10P78508 379 aa13.21□□□□□ -0.3
SGCE-202ENST00000415788 KLRB1Q12918 225 aa13.21□□□□□ -0.3
SGCE-202ENST00000415788 GPR50Q13585 617 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms