RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 FAHD2AQ96GK7 314 aa2.59□□□□□ -1.99
HMGB1P11-201ENST00000413899 AKR1E2Q96JD6 320 aa2.59□□□□□ -1.99
HMGB1P11-201ENST00000413899 SMIM14Q96QK8 99 aa2.59□□□□□ -1.99
HMGB1P11-201ENST00000413899 MCHR1Q99705 422 aa2.59□□□□□ -1.99
HMGB1P11-201ENST00000413899 DHX33Q9H6R0 707 aaKnown RBP2.59□□□□□ -1.99
HMGB1P11-201ENST00000413899 WDR76Q9H967 626 aa2.59□□□□□ -1.99
HMGB1P11-201ENST00000413899 RRAGDQ9NQL2 400 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P11-201ENST00000413899 DCDC2Q9UHG0 476 aa2.59□□□□□ -1.99
HMGB1P11-201ENST00000413899 SMC3Q9UQE7 1217 aa2.59□□□□□ -1.99
HMGB1P11-201ENST00000413899 GAKO14976 1311 aa2.59□□□□□ -2
HMGB1P11-201ENST00000413899 PPIAL4CA0A0B4J2A2 164 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 WI2-2373I1.2A0A1W2PRP0 233 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 VPS37CA5D8V6 355 aaPredicted RBP2.58□□□□□ -2
HMGB1P11-201ENST00000413899 ZNF705EA8MWA4 302 aaPredicted RBP2.58□□□□□ -2
HMGB1P11-201ENST00000413899 IDH1O75874 414 aaKnown RBP2.58□□□□□ -2
HMGB1P11-201ENST00000413899 MBD3O95983 291 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 IGHV3-48P01763 117 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 PPIAL4GP0DN37 164 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 CD1EP15812 388 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 MGMTP16455 207 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 TPSB2P20231 275 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 SERPINA2P20848 420 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 VDAC1P21796 283 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 PSMA5P28066 241 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 BDKRB1P46663 353 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 ACADVLP49748 655 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 BPIFB3P59826 476 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 MECOMQ03112 1051 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 CSTF1Q05048 431 aaKnown RBP2.58□□□□□ -2
HMGB1P11-201ENST00000413899 TPSAB1Q15661 275 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 IL17AQ16552 155 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 TIGITQ495A1 244 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 CFAP221Q4G0U5 840 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 TMEM41BQ5BJD5 291 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 KRTAP5-1Q6L8H4 278 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 HSD17B13Q7Z5P4 300 aaPredicted RBP2.58□□□□□ -2
HMGB1P11-201ENST00000413899 TMEM179BQ7Z7N9 219 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 TMEM17Q86X19 198 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 NBPF5PQ86XG9 351 aaPredicted RBP2.58□□□□□ -2
HMGB1P11-201ENST00000413899 TGIF2LYQ8IUE0 185 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 AENQ8WTP8 325 aaKnown RBP2.58□□□□□ -2
HMGB1P11-201ENST00000413899 SDR42E1Q8WUS8 393 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 NEIL2Q969S2 332 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 LLPHQ9BRT6 129 aaKnown RBP2.58□□□□□ -2
HMGB1P11-201ENST00000413899 NICN1Q9BSH3 213 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 CNPY3Q9BT09 278 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 CHIAQ9BZP6 476 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 FANCFQ9NPI8 374 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 POLE3Q9NRF9 147 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 PAK1IP1Q9NWT1 392 aaPredicted RBP2.58□□□□□ -2
HMGB1P11-201ENST00000413899 ZNF221Q9UK13 617 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 ISY1Q9ULR0 285 aaKnown RBP2.58□□□□□ -2
HMGB1P11-201ENST00000413899 CHMP2BQ9UQN3 213 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 DDX49Q9Y6V7 483 aaKnown RBP2.58□□□□□ -2
HMGB1P11-201ENST00000413899 MYH11P35749 1972 aa2.58□□□□□ -2
HMGB1P11-201ENST00000413899 MGAMO43451 1857 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 SMIM28A0A1B0GU29 152 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 A0A1W2PNU3 283 aaPredicted RBP2.57□□□□□ -2
HMGB1P11-201ENST00000413899 STX7O15400 261 aaKnown RBP2.57□□□□□ -2
HMGB1P11-201ENST00000413899 PLEKHA8P1O95397 391 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 ACTL6AO96019 429 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 TIMP1P01033 207 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 PTMSP20962 102 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 TBXA2RP21731 343 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 CYP2F1P24903 491 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 KRTAP5-9P26371 169 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 CD80P33681 288 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 GCKP35557 465 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 BTDP43251 543 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 RPS8P62241 208 aaKnown RBP2.57□□□□□ -2
HMGB1P11-201ENST00000413899 UBE2HP62256 183 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 RAB40BQ12829 278 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 CAPRIN1Q14444 709 aaKnown RBP2.57□□□□□ -2
HMGB1P11-201ENST00000413899 IMMTQ16891 758 aaKnown RBP2.57□□□□□ -2
HMGB1P11-201ENST00000413899 ASPHD2Q6ICH7 369 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 SULT1C3Q6IMI6 304 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 LINC01561Q8N1V8 128 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 CCDC71LQ8N9Z2 235 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 ZBTB44Q8NCP5 570 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 OR9A1PQ8NGU1 263 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 CNIH3Q8TBE1 160 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 SLC5A11Q8WWX8 675 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 MYLPFQ96A32 169 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 OR5B2Q96R09 309 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 TXN2Q99757 166 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 GSDMCQ9BYG8 508 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 RHOJQ9H4E5 214 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 PTGES2Q9H7Z7 377 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 CALHM2Q9HA72 323 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 MARCH5Q9NX47 278 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 B3GNT2Q9NY97 397 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 MFHAS1Q9Y4C4 1052 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 OARD1Q9Y530 152 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 ZNF318Q5VUA4 2279 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 SSC5DA1L4H1 1573 aa2.57□□□□□ -2
HMGB1P11-201ENST00000413899 RALGAPA1Q6GYQ0 2036 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 A0A1B0GWB2 263 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 TUBAL3A6NHL2 446 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 EMC8O43402 210 aa2.56□□□□□ -2
HMGB1P11-201ENST00000413899 CYTH3O43739 400 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms