RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 ENPP5Q9UJA9 477 aa16.02■□□□□ 0.16
PHRF1-202ENST00000413872 B4DXG7 233 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 TRAPPC2LH3BP13 241 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 FBXO45P0C2W1 286 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 AKR1C4P17516 323 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 CD34P28906 385 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 EFNA3P52797 238 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 ILKQ13418 452 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 GRINAQ7Z429 371 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 MEX3DQ86XN8 651 aaKnown RBP16.02■□□□□ 0.15
PHRF1-202ENST00000413872 PTRH1Q86Y79 214 aaKnown RBP16.02■□□□□ 0.15
PHRF1-202ENST00000413872 ASB12Q8WXK4 309 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 C22orf15Q8WYQ4 148 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 ZPBPQ9BS86 351 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 OR52A5Q9H2C5 316 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 TP63Q9H3D4 680 aaPredicted RBP16.02■□□□□ 0.15
PHRF1-202ENST00000413872 OBP2BQ9NPH6 170 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 WNT16Q9UBV4 365 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 FZD6O60353 706 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 IFNA2P01563 188 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 MTHFD2P13995 350 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 ITGB8P26012 769 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 PTH2RP49190 550 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 PPP2CBP62714 309 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 PPP2CAP67775 309 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 MEF2DQ14814 521 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 LRRC37A5PQ49AS3 106 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 CCSAPQ6IQ19 270 aaPredicted RBP16.02■□□□□ 0.15
PHRF1-202ENST00000413872 TMEM207Q6UWW9 146 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 CAMKMTQ7Z624 323 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 PELI3Q8N2H9 469 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 OR11L1Q8NGX0 322 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 TEX101Q9BY14 249 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 OLAHQ9NV23 265 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF223Q9UK11 482 aaPredicted RBP16.02■□□□□ 0.15
PHRF1-202ENST00000413872 NME7Q9Y5B8 376 aa16.02■□□□□ 0.15
PHRF1-202ENST00000413872 FAM183AA6NL82 134 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 NUDT21O43809 227 aaKnown RBP16.01■□□□□ 0.15
PHRF1-202ENST00000413872 RAB3DO95716 219 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 PTTG1O95997 202 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 ADH6P28332 368 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 TEAD1P28347 426 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 LSSP48449 732 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 DOCK1Q14185 1865 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 OR7E24Q6IFN5 339 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 FRMD1Q8N878 549 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 C7orf50Q9BRJ6 194 aaKnown RBP16.01■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF281Q9Y2X9 895 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 J3KTA2 159 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 CNOT4O95628 575 aaKnown RBP16.01■□□□□ 0.15
PHRF1-202ENST00000413872 CCL11P51671 97 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 MPEG1Q2M385 716 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 COL28A1Q2UY09 1125 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 PCGF3Q3KNV8 242 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 AGBL4Q5VU57 503 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 SORCS2Q96PQ0 1159 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 NUDT22Q9BRQ3 303 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 ERVK13-1Q9NX77 482 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 SIPA1L3O60292 1781 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-202ENST00000413872 IFNA1P01562 189 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 ALPLP05186 524 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 FPR3P25089 353 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 RGS6P49758 472 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 CCBE1Q6UXH8 406 aaPredicted RBP16.01■□□□□ 0.15
PHRF1-202ENST00000413872 CDHR4A6H8M9 788 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 GPR3P46089 330 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 IL10RAQ13651 578 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 HBMQ6B0K9 141 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 SGPP2Q8IWX5 399 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 ALG12Q9BV10 488 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 CDCP1Q9H5V8 836 aa16.01■□□□□ 0.15
PHRF1-202ENST00000413872 TMEM212A6NML5 194 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF587BE7ETH6 402 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 AQP2P41181 271 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 HACD4Q5VWC8 232 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 TMEM68Q96MH6 324 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 PHB2Q99623 299 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 VSX1Q9NZR4 365 aaPredicted RBP16■□□□□ 0.15
PHRF1-202ENST00000413872 GHRLQ9UBU3 117 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 THSD7AQ9UPZ6 1657 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 ZNF736B4DX44 427 aaPredicted RBP16■□□□□ 0.15
PHRF1-202ENST00000413872 RAD1O60671 282 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 CD14P08571 375 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 FAM69AQ5T7M9 428 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 MORN4Q8NDC4 146 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 GPR78Q96P69 363 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 TNFRSF13CQ96RJ3 184 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 SYNPO2LQ9H987 977 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 LILRA5A6NI73 299 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 DSCR3O14972 297 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 EPHA5P54756 1037 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 DTX3Q8N9I9 347 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 SLC16A11Q8NCK7 471 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 EGLN3Q9H6Z9 239 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 NPFFR2Q9Y5X5 522 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 SMCO3A2RU48 225 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 GASTP01350 101 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 FCGR2AP12318 317 aa16■□□□□ 0.15
PHRF1-202ENST00000413872 APOBEC1P41238 236 aaKnown RBP16■□□□□ 0.15
PHRF1-202ENST00000413872 NXNL2Q5VZ03 156 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms