RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 NOSIPQ9Y314 301 aaKnown RBP13.13□□□□□ -0.31
LIMS4-201ENST00000413601 OTOGQ6ZRI0 2925 aa13.13□□□□□ -0.31
LIMS4-201ENST00000413601 RAI1Q7Z5J4 1906 aaPredicted RBP13.13□□□□□ -0.31
LIMS4-201ENST00000413601 LOC100653049A0A140TA62 436 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 LIPT2A6NK58 231 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 TMEM229AB2RXF0 380 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 EIF1BO60739 113 aaKnown RBP13.12□□□□□ -0.31
LIMS4-201ENST00000413601 SERPINB7O75635 380 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 KRT34O76011 436 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 MFN2O95140 757 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 AKR7A3O95154 331 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 GPIP06744 558 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 HTR2AP28223 471 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 ART1P52961 327 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 SLC16A1P53985 500 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 PCBP3P57721 371 aaKnown RBP13.12□□□□□ -0.31
LIMS4-201ENST00000413601 RBBP4Q09028 425 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 CYLC2Q14093 348 aaPredicted RBP13.12□□□□□ -0.31
LIMS4-201ENST00000413601 P2RY6Q15077 328 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 TESK1Q15569 626 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 OTUD3Q5T2D3 398 aaPredicted RBP13.12□□□□□ -0.31
LIMS4-201ENST00000413601 C1orf140Q5VVS0 124 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 REP15Q6BDI9 236 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 PAQR6Q6TCH4 344 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 Q6ZT83 130 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 NET1Q7Z628 596 aaPredicted RBP13.12□□□□□ -0.31
LIMS4-201ENST00000413601 SNX32Q86XE0 403 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 TMEM99Q8N816 258 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 SMYD1Q8NB12 490 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 STEAP2Q8NFT2 490 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 C10orf82Q8WW14 230 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 NINJ1Q92982 152 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 WFDC6Q9BQY6 131 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 HDHD5Q9BXW7 423 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 PIF1Q9H611 641 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 ADPRHL2Q9NX46 363 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 RPS6KB2Q9UBS0 482 aa13.12□□□□□ -0.31
LIMS4-201ENST00000413601 PRORSD1PA6NEY8 169 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 ELOA3DA6NLF2 546 aaPredicted RBP13.11□□□□□ -0.31
LIMS4-201ENST00000413601 M0QX08 132 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 GPR171O14626 319 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 MRASO14807 208 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 IGHV3-9P01782 118 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 OPN1SWP03999 348 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 IL32P24001 234 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 DNASE1P24855 282 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 ADSLP30566 484 aaPredicted RBP13.11□□□□□ -0.31
LIMS4-201ENST00000413601 RGS8P57771 180 aaPredicted RBP13.11□□□□□ -0.31
LIMS4-201ENST00000413601 ITGADQ13349 1161 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 MAPRE2Q15555 327 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 ELOA3BQ3SY89 546 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 RABL3Q5HYI8 236 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 ALKBH2Q6NS38 261 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 PAMR1Q6UXH9 720 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 WFDC8Q8IUA0 241 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 UBE2J2Q8N2K1 259 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 LSMEM1Q8N8F7 131 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 BHLHE22Q8NFJ8 381 aaPredicted RBP13.11□□□□□ -0.31
LIMS4-201ENST00000413601 ELOA3Q8NG57 546 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 OR52E4Q8NGH9 312 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 KISS1RQ969F8 398 aaPredicted RBP13.11□□□□□ -0.31
LIMS4-201ENST00000413601 APH1AQ96BI3 265 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 LRRC58Q96CX6 371 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 HS3ST6Q96QI5 342 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 TAPBPLQ9BX59 468 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 OR10A4Q9H209 315 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 ARMCX1Q9P291 453 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 SLC13A4Q9UKG4 626 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 EDARQ9UNE0 448 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 DSCAMO60469 2012 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 CCDC168Q8NDH2 2452 aa13.11□□□□□ -0.31
LIMS4-201ENST00000413601 A0A1B0GWA3 101 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 BBIP1A8MTZ0 92 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 FXYD1O00168 92 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 KLF4O43474 513 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 TPST2O60704 377 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 NPIPB7O75200 414 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 MRPL33O75394 65 aaKnown RBP13.1□□□□□ -0.31
LIMS4-201ENST00000413601 LYZL6O75951 148 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 RAF1P04049 648 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 IGHV1-2P23083 117 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 LOXP28300 417 aaPredicted RBP13.1□□□□□ -0.31
LIMS4-201ENST00000413601 PCGF2P35227 344 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 RPS5P46782 204 aaKnown RBP13.1□□□□□ -0.31
LIMS4-201ENST00000413601 GZMMP51124 257 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 NCALDP61601 193 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 EGR4Q05215 589 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 KEAP1Q14145 624 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 SLC17A1Q14916 467 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 DUSP7Q16829 419 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 COQ5Q5HYK3 327 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 BHLHA15Q7RTS1 189 aaPredicted RBP13.1□□□□□ -0.31
LIMS4-201ENST00000413601 STK35Q8TDR2 534 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 TRIM2Q9C040 744 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 FLVCR1Q9Y5Y0 555 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 CAPN7Q9Y6W3 813 aa13.1□□□□□ -0.31
LIMS4-201ENST00000413601 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.09□□□□□ -0.31
LIMS4-201ENST00000413601 AQP7P3A6NL99 342 aa13.09□□□□□ -0.31
LIMS4-201ENST00000413601 M0R3H8 397 aa13.09□□□□□ -0.31
LIMS4-201ENST00000413601 ATE1O95260 518 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms