RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 CALCRP30988 508 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 TLX1P31314 330 aaPredicted RBP16.23■□□□□ 0.19
SDCBP-202ENST00000413219 NUP62P37198 522 aaPredicted RBP16.23■□□□□ 0.19
SDCBP-202ENST00000413219 PTH2RP49190 550 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 MAP2K6P52564 334 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 PSMA6P60900 246 aaKnown RBP16.23■□□□□ 0.19
SDCBP-202ENST00000413219 FHL1Q13642 323 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 CAMK1Q14012 370 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 COX18Q8N8Q8 333 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 CDRT4Q8N9R6 151 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 THEM6Q8WUY1 208 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 ING5Q8WYH8 240 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 SERINC2Q96SA4 455 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 GFI1Q99684 422 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 SEC22CQ9BRL7 303 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 ZNF426Q9BUY5 554 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 NOX4Q9NPH5 578 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 C12orf4Q9NQ89 552 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 POLE3Q9NRF9 147 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 ANKRD10Q9NXR5 420 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 CHRNA9Q9UGM1 479 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 GLS2Q9UI32 602 aa16.23■□□□□ 0.19
SDCBP-202ENST00000413219 A0A087WV62 115 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 OR52A4PA6NMU1 304 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 KRBOX1C9JBD0 128 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 PEX12O00623 359 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 LDOC1O95751 146 aaPredicted RBP16.22■□□□□ 0.19
SDCBP-202ENST00000413219 NAT1P18440 290 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 SDHBP21912 280 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 ERVFC1P60507 584 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 PPP2CBP62714 309 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 PPP2CAP67775 309 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 LGALS3BPQ08380 585 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 HTR4Q13639 388 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 GAB4Q2WGN9 574 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 TMEM81Q6P7N7 255 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 OR14A16Q8NHC5 309 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 S100A16Q96FQ6 103 aaKnown RBP16.22■□□□□ 0.19
SDCBP-202ENST00000413219 CFHR5Q9BXR6 569 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 KIR3DX1Q9H7L2 352 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 NCDNQ9UBB6 729 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 FOXJ3Q9UPW0 622 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 PIN1P1O15428 100 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 LATO43561 262 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 PCDH8O95206 1070 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 HNRNPA1P09651 372 aaKnown RBP eCLIP16.22■□□□□ 0.19
SDCBP-202ENST00000413219 CALCBP10092 127 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 HCCSP53701 268 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 NOGQ13253 232 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 IRF4Q15306 451 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 TRMT12Q53H54 448 aaKnown RBP16.22■□□□□ 0.19
SDCBP-202ENST00000413219 HES5Q5TA89 166 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 ARL14Q8N4G2 192 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 MRPL43Q8N983 215 aaKnown RBP16.22■□□□□ 0.19
SDCBP-202ENST00000413219 OR52E2Q8NGJ4 325 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 NSMAFQ92636 917 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 LINC00052Q96N35 136 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 MYADMQ96S97 322 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 DPYSL5Q9BPU6 564 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 SHARPINQ9H0F6 387 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 CA10Q9NS85 328 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 ZNF69Q9UC07 566 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 GNG8Q9UK08 70 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 SCML1Q9UN30 329 aa16.22■□□□□ 0.19
SDCBP-202ENST00000413219 HMSDA8MTL9 139 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 ACOT7O00154 380 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 TSPAN9O75954 239 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 NDUFB6O95139 128 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 SMIM10L1P0DMW3 83 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 DRD3P35462 400 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 DIO1P49895 249 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 GRASPQ7Z6J2 395 aaPredicted RBP16.21■□□□□ 0.19
SDCBP-202ENST00000413219 NAXDQ8IW45 347 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 SP7Q8TDD2 431 aaPredicted RBP16.21■□□□□ 0.19
SDCBP-202ENST00000413219 SCARB1Q8WTV0 552 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 PIGKQ92643 395 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 SMIM10Q96HG1 83 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 SMAD5Q99717 465 aaKnown RBP16.21■□□□□ 0.19
SDCBP-202ENST00000413219 PDCD1LG2Q9BQ51 273 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 TTTY10Q9BZA0 68 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 ADAP2Q9NPF8 381 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 FBXO34Q9NWN3 711 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 TAS2R10Q9NYW0 307 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 USP36Q9P275 1121 aaKnown RBP16.21■□□□□ 0.19
SDCBP-202ENST00000413219 HEBP2Q9Y5Z4 205 aa16.21■□□□□ 0.19
SDCBP-202ENST00000413219 NPIPA5A0A0B4J1W7 369 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 GXYLT2A0PJZ3 443 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 A8MUA0 341 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 NPIPA7E9PJI5 369 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 MAGEB4O15481 346 aaPredicted RBP16.2■□□□□ 0.18
SDCBP-202ENST00000413219 BRINP1O60477 761 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 PPM1BO75688 479 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 NMBP08949 121 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 IFI6P09912 130 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 NPIPA8P0DM63 369 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 PLAURQ03405 335 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 IL10RAQ13651 578 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 LINC00303Q3SY05 128 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 SLC35D3Q5M8T2 416 aa16.2■□□□□ 0.18
SDCBP-202ENST00000413219 PWWP2BQ6NUJ5 590 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms