RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 LMX1BO60663 402 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 WNT11O96014 354 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 C1QCP02747 245 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CSF3P09919 207 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 IGHV4-31P0DP07 118 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 IL7RP16871 459 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ZNF16P17020 682 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 MPGP29372 298 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 SLC1A3P43003 542 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 NME5P56597 212 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ABCE1P61221 599 aaKnown RBP12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 SLC25A3Q00325 362 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 GNA13Q14344 377 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 GGTLC2Q14390 218 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CASP8Q14790 479 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 SLC17A1Q14916 467 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CHI3L2Q15782 390 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 SYPL1Q16563 259 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 SPANXN4Q5MJ08 99 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 OTUD3Q5T2D3 398 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 AP1ARQ63HQ0 302 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 AAED1Q7RTV5 226 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 C17orf78Q8N4C9 275 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 C1orf162Q8NEQ5 155 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 TESCQ96BS2 214 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 C3orf49Q96BT1 292 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 AURKBQ96GD4 344 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ZIM3Q96PE6 472 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 TRNT1Q96Q11 434 aaKnown RBP12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 MTHFD2LQ9H903 347 aaPredicted RBP12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 LPAR3Q9UBY5 353 aa12.19□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ZC3H12DA2A288 527 aaKnown RBP12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CFAP73A6NFT4 308 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CCDC154A6NI56 674 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 AGAP5A6NIR3 686 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 TYROBPO43914 113 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 AKR7A3O95154 331 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 SERPINE1P05121 402 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 NR2F1P10589 423 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 UQCRBP14927 111 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 LBPP18428 481 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CXCR1P25024 350 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 PDLIM4P50479 330 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 RPL14P50914 215 aaKnown RBP12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 PLAURQ03405 335 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CEACAM7Q14002 265 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 OR7A5Q15622 319 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 FAM174BQ3ZCQ3 159 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 HIKESHIQ53FT3 197 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 TMEM225Q6GV28 225 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 PAQR6Q6TCH4 344 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ZNF621Q6ZSS3 439 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 GPAT4Q86UL3 456 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CMIPQ8IY22 773 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 TMEM99Q8N816 258 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 VRK1Q99986 396 aaPredicted RBP12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 KCNS3Q9BQ31 491 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 AMBRA1Q9C0C7 1298 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CHODLQ9H9P2 273 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 TMEM160Q9NX00 188 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 RAP2CQ9Y3L5 183 aa12.18□□□□□ -0.46
RAB11FIP3-202ENST00000412256 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.17□□□□□ -0.466e-35■■■■□ 21.5
RAB11FIP3-202ENST00000412256 LOC100289279A0A1B0GTE1 492 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 GSNP06396 782 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 GPIP06744 558 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CHRM4P08173 479 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 SRD5A1P18405 259 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ETV4P43268 484 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 SLC1A6P48664 564 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 GZMKP49863 264 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ANXA11P50995 505 aaKnown RBP12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 MAP2K6P52564 334 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 CLNS1AP54105 237 aaKnown RBP12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 MST1LQ2TV78 715 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 IQCCQ4KMZ1 466 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 LRRC74BQ6ZQY2 392 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 TRIML2Q8N7C3 387 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ZIC4Q8N9L1 334 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 POMGNT2Q8NAT1 580 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 OR9K2Q8NGE7 335 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 PNPT1Q8TCS8 783 aaKnown RBP12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 WDR60Q8WVS4 1066 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 FOXN4Q96NZ1 517 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 ZNF385AQ96PM9 386 aaKnown RBP12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 PANX1Q96RD7 426 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 NUF2Q9BZD4 464 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 C20orf27Q9GZN8 174 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 SLC38A1Q9H2H9 487 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 RLIMQ9NVW2 624 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 TMEM45AQ9NWC5 275 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 FKBP7Q9Y680 259 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 NBEAL1Q6ZS30 2694 aa12.17□□□□□ -0.46
RAB11FIP3-202ENST00000412256 LIPT2A6NK58 231 aa12.16□□□□□ -0.46
RAB11FIP3-202ENST00000412256 E9PBE3 544 aa12.16□□□□□ -0.46
RAB11FIP3-202ENST00000412256 DBIP07108 87 aaKnown RBP12.16□□□□□ -0.46
RAB11FIP3-202ENST00000412256 GKN3PP0CG01 181 aa12.16□□□□□ -0.46
RAB11FIP3-202ENST00000412256 SERPINF1P36955 418 aa12.16□□□□□ -0.46
RAB11FIP3-202ENST00000412256 NR4A2P43354 598 aa12.16□□□□□ -0.46
RAB11FIP3-202ENST00000412256 UFM1P61960 85 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms