RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 OR1A2Q9Y585 309 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 IRF2P14316 349 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 PRAMEF18Q5VWM3 479 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 ADPRHL1Q8NDY3 354 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 LRRC37A3O60309 1634 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 GABRR2P28476 465 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 POM121L1PQ3SYA9 428 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 NXNL2Q5VZ03 156 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 STEAP1BQ6NZ63 245 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 SLAIN1Q8ND83 568 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 NPY6RQ99463 290 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 NFATC4Q14934 902 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 OR6M1Q8NGM8 313 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 CLSTN3Q9BQT9 956 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 PELI2Q9HAT8 420 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 A0A087WUU8 490 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 FAM155AB1AL88 458 aaPredicted RBP12.08□□□□□ -0.48
COL6A3-206ENST00000409809 USF1P22415 310 aaPredicted RBP12.08□□□□□ -0.48
COL6A3-206ENST00000409809 PGGHGQ32M88 737 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 ADPRMQ3LIE5 342 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 C14orf80Q86SX3 495 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 CELF2-AS1Q8N7Q2 184 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 GPR45Q9Y5Y3 372 aa12.08□□□□□ -0.48
COL6A3-206ENST00000409809 EPHX1P07099 455 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 OR1D2P34982 312 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 KIAA1024LP59773 190 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 UBE2MP61081 183 aaKnown RBP12.07□□□□□ -0.48
COL6A3-206ENST00000409809 PRAMEF8Q5VWM4 474 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 PRAMEF7Q5VXH5 474 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 OR8J2Q8NGG1 315 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 OR5L1Q8NGL2 311 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 TANKQ92844 425 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 SYT17Q9BSW7 474 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 REV1Q9UBZ9 1251 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 RAB22AQ9UL26 194 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 MED16Q9Y2X0 877 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 OR5H14A6NHG9 310 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 WNT10BO00744 389 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 ASGR2P07307 311 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 DUSP1P28562 367 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 IGSF11Q5DX21 431 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 TRIM61Q5EBN2 209 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CBLL1Q75N03 491 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 ZFP41Q8N8Y5 198 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 OR8U1Q8NH10 309 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CD200R1Q8TD46 325 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 EXTL1Q92935 676 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 BORCS6Q96GS4 357 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 LMF1Q96S06 567 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 NTMT1Q9BV86 223 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CLMPQ9H6B4 373 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 I6L893 689 aaPredicted RBP12.07□□□□□ -0.48
COL6A3-206ENST00000409809 HTR1FP30939 366 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 ABHD12BQ7Z5M8 362 aaPredicted RBP12.07□□□□□ -0.48
COL6A3-206ENST00000409809 STPG2Q8N412 459 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CDRT4Q8N9R6 151 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 DNAJC13O75165 2243 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 ADH1BP00325 375 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CD63P08962 238 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CT45A6P0DMU7 189 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CT45A5P0DMU8 189 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CT45A7P0DMV0 189 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CT45A8P0DMV1 189 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CT45A9P0DMV2 189 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 SLC11A1P49279 550 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 ZNF91Q05481 1191 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 EXOSC2Q13868 293 aaKnown RBP12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CT45A2Q5DJT8 189 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CT45A1Q5HYN5 189 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 KDM4DQ6B0I6 523 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 OGFOD3Q6PK18 319 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 SLC24A4Q8NFF2 622 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CT45A3Q8NHU0 189 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 RAB8BQ92930 207 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 RASD2Q96D21 266 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 B4GAT1O43505 415 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 CLEC3AO75596 197 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 HNRNPKP61978 463 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL6A3-206ENST00000409809 SEMA3BQ13214 749 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 UMODL1-AS1Q8N2C9 162 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 DYNC2LI1Q8TCX1 351 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 ISL2Q96A47 359 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 STEAP1Q9UHE8 339 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 MYO7AQ13402 2215 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 S1PR4O95977 384 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 FRMPD2BQ6IN97 320 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 GPR119Q8TDV5 335 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 ARRDC5A6NEK1 342 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 BCL2L11O43521 198 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 VNN1O95497 513 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 MGST1P10620 155 aaKnown RBP12.07□□□□□ -0.48
COL6A3-206ENST00000409809 HUS1BQ8NHY5 278 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 BPIFA2Q96DR5 249 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 NSG2Q9Y328 171 aa12.07□□□□□ -0.48
COL6A3-206ENST00000409809 GPR37L1O60883 481 aa12.06□□□□□ -0.48
COL6A3-206ENST00000409809 B3GNT9Q6UX72 402 aa12.06□□□□□ -0.48
COL6A3-206ENST00000409809 CPNE8Q86YQ8 564 aa12.06□□□□□ -0.48
COL6A3-206ENST00000409809 OR6K3Q8NGY3 331 aa12.06□□□□□ -0.48
COL6A3-206ENST00000409809 C2CD4CQ8TF44 421 aa12.06□□□□□ -0.48
COL6A3-206ENST00000409809 GABARAPL1Q9H0R8 117 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms