RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 LIX1LQ8IVB5 337 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 ELOA3Q8NG57 546 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 MFSD8Q8NHS3 518 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 POP5Q969H6 163 aaKnown RBP13.21□□□□□ -0.29
SUMO1-207ENST00000409498 GMPPAQ96IJ6 420 aaPredicted RBP13.21□□□□□ -0.29
SUMO1-207ENST00000409498 HSH2DQ96JZ2 352 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 NSMCE2Q96MF7 247 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 PRSS27Q9BQR3 290 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 PTDSS2Q9BVG9 487 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 SELENONQ9NZV5 590 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 JKAMPQ9P055 326 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 A4GNTQ9UNA3 340 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 KLF2Q9Y5W3 355 aaPredicted RBP13.21□□□□□ -0.29
SUMO1-207ENST00000409498 FLNCQ14315 2725 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 DOPEY1Q5JWR5 2465 aa13.21□□□□□ -0.29
SUMO1-207ENST00000409498 TENM4Q6N022 2769 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 INTS1Q8N201 2190 aaKnown RBP13.2□□□□□ -0.3
SUMO1-207ENST00000409498 LIPT2A6NK58 231 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 CPSF4LA6NMK7 179 aaKnown RBP13.2□□□□□ -0.3
SUMO1-207ENST00000409498 SMAD9O15198 467 aaKnown RBP13.2□□□□□ -0.3
SUMO1-207ENST00000409498 OR2T1O43869 369 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 EIF1BO60739 113 aaKnown RBP13.2□□□□□ -0.3
SUMO1-207ENST00000409498 SS18L1O75177 396 aaPredicted RBP13.2□□□□□ -0.3
SUMO1-207ENST00000409498 ZNF682O95780 498 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 IGF2P01344 180 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 IFNW1P05000 195 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 IDUAP35475 653 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 KIR2DL2P43627 348 aaPredicted RBP13.2□□□□□ -0.3
SUMO1-207ENST00000409498 MS4A2Q01362 244 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 TRAP1Q12931 704 aaKnown RBP13.2□□□□□ -0.3
SUMO1-207ENST00000409498 FOXF2Q12947 444 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 IQCCQ4KMZ1 466 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 C1orf140Q5VVS0 124 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 ABLIM2Q6H8Q1 611 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 FCRLAQ7L513 359 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 GDF7Q7Z4P5 450 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 TSEN54Q7Z6J9 526 aaKnown RBP13.2□□□□□ -0.3
SUMO1-207ENST00000409498 ASB9Q96DX5 294 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 PYURFQ96I23 114 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 C7orf34Q96L11 122 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 PRRC1Q96M27 445 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 THTPAQ9BU02 230 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 PRRG4Q9BZD6 226 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 SLC19A3Q9BZV2 496 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 BCO1Q9HAY6 547 aa13.2□□□□□ -0.3
SUMO1-207ENST00000409498 ING1Q9UK53 422 aaPredicted RBP13.2□□□□□ -0.3
SUMO1-207ENST00000409498 GCN1Q92616 2671 aaKnown RBP13.2□□□□□ -0.3
SUMO1-207ENST00000409498 IGKV3D-15A0A087WSY6 115 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 A0A1W2PNV4 684 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 TCRBV5S2A0A599 114 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 DVL2O14641 736 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 ACOT8O14734 319 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 GSC2O15499 205 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 DNAJC8O75937 253 aaPredicted RBP13.19□□□□□ -0.3
SUMO1-207ENST00000409498 PRKD3O94806 890 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 PRSS23O95084 383 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 GPIP06744 558 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 PCYT1AP49585 367 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 SLC16A1P53985 500 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 CBX1P83916 185 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 PIN1Q13526 163 aaPredicted RBP13.19□□□□□ -0.3
SUMO1-207ENST00000409498 FBXL19-AS1Q494R0 122 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 FAM69AQ5T7M9 428 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 PAQR6Q6TCH4 344 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 WDR88Q6ZMY6 472 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 DEF8Q6ZN54 512 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 FKBP9P1Q75LS8 142 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 FAM214BQ7L5A3 538 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 RELL2Q8NC24 303 aaPredicted RBP13.19□□□□□ -0.3
SUMO1-207ENST00000409498 CA5BP1Q8WTZ4 195 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 ROBO4Q8WZ75 1007 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 INTS12Q96CB8 462 aaKnown RBP13.19□□□□□ -0.3
SUMO1-207ENST00000409498 ZHX1-C8orf76Q96EF9 292 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 KTI12Q96EK9 354 aaPredicted RBP13.19□□□□□ -0.3
SUMO1-207ENST00000409498 SLC41A3Q96GZ6 507 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 PSD2Q9BQI7 771 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 TACO1Q9BSH4 297 aaKnown RBP13.19□□□□□ -0.3
SUMO1-207ENST00000409498 MMADHCQ9H3L0 296 aaPredicted RBP13.19□□□□□ -0.3
SUMO1-207ENST00000409498 PIGMQ9H3S5 423 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 RIMS3Q9UJD0 308 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 SLC7A7Q9UM01 511 aa13.19□□□□□ -0.3
SUMO1-207ENST00000409498 TRAV36DV7A0A075B6V5 113 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 ZNF724A8MTY0 619 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 HAX1O00165 279 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 FFAR1O14842 300 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 AHSA1O95433 338 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 CGAP01215 116 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 CD8BP10966 210 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 ATP6V1B2P21281 511 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 FPR1P21462 350 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 RBM34P42696 430 aaKnown RBP13.18□□□□□ -0.3
SUMO1-207ENST00000409498 P2RY4P51582 365 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 OR2B6P58173 313 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 TAS2R41P59536 307 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 TFF3Q07654 80 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 ST3GAL3Q11203 375 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 MFSD13AQ14CX5 517 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 DHFR2Q86XF0 187 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 OFCC1Q8IZS5 231 aa13.18□□□□□ -0.3
SUMO1-207ENST00000409498 FAM86B1Q8N7N1 296 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms