RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 EGR4Q05215 589 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 GALEQ14376 348 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 TOMM34Q15785 309 aaPredicted RBP18.87■□□□□ 0.61
USP39-203ENST00000409470 Q6ZNX1 250 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 OR5W2Q8NH69 310 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 SMPDL3BQ92485 455 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 MOGAT1Q96PD6 335 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 CRB3Q9BUF7 120 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 KATNB1Q9BVA0 655 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 TMED9Q9BVK6 235 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 TPK1Q9H3S4 243 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 MMP25Q9NPA2 562 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 NRIP3Q9NQ35 241 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 HAO2Q9NYQ3 351 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 CRNNQ9UBG3 495 aaPredicted RBP18.87■□□□□ 0.61
USP39-203ENST00000409470 GSTK1Q9Y2Q3 226 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 NPFFR2Q9Y5X5 522 aa18.87■□□□□ 0.61
USP39-203ENST00000409470 TAF4O00268 1085 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 MAGEB3O15480 346 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 FADS1O60427 444 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 SULT1C4O75897 302 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 ONECUT2O95948 504 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 GP1BBP13224 206 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 AQP2P41181 271 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 FABP5Q01469 135 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 POU4F2Q12837 409 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 CBFBQ13951 182 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 LCN10Q6JVE6 187 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 TUBA3EQ6PEY2 450 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 BPHLQ86WA6 291 aaPredicted RBP18.86■□□□□ 0.61
USP39-203ENST00000409470 SNX29P2Q8IUI4 249 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 KTI12Q96EK9 354 aaPredicted RBP18.86■□□□□ 0.61
USP39-203ENST00000409470 LPAR4Q99677 370 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 BABAM2Q9NXR7 383 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 TRBV11-1A0A0K0K1C0 115 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 MEN1O00255 615 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 ARPC3O15145 178 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 FGF5P12034 268 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 RUNX1T1Q06455 604 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 IL11RAQ14626 422 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 GHDCQ8N2G8 530 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 LIPHQ8WWY8 451 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 ABTB1Q969K4 478 aaPredicted RBP18.86■□□□□ 0.61
USP39-203ENST00000409470 BARHL1Q9BZE3 327 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 SMOC1Q9H4F8 434 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 GALNT8Q9NY28 637 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 HIF3AQ9Y2N7 669 aa18.86■□□□□ 0.61
USP39-203ENST00000409470 MPDZO75970 2070 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 A0A075B6Q4 140 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 IDH3BO43837 385 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 SERPINI2O75830 405 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 IL1AP01583 271 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 CD40LGP29965 261 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 P2RX1P51575 399 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 LGALS3BPQ08380 585 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 EFR3AQ14156 821 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 DCDC5Q6ZRR9 648 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 CPEB2Q7Z5Q1 589 aaKnown RBP18.85■□□□□ 0.61
USP39-203ENST00000409470 CENPSQ8N2Z9 138 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 CHPT1Q8WUD6 406 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 ATOH1Q92858 354 aaPredicted RBP18.85■□□□□ 0.61
USP39-203ENST00000409470 RASD2Q96D21 266 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 ZMYND19Q96E35 227 aaPredicted RBP18.85■□□□□ 0.61
USP39-203ENST00000409470 CEP19Q96LK0 163 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 GPX7Q96SL4 187 aaPredicted RBP18.85■□□□□ 0.61
USP39-203ENST00000409470 NMNAT3Q96T66 252 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 SPSB2Q99619 263 aa18.85■□□□□ 0.61
USP39-203ENST00000409470 NTN3O00634 580 aaPredicted RBP18.84■□□□□ 0.61
USP39-203ENST00000409470 GDF9O60383 454 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 CDC40O60508 579 aaKnown RBP eCLIP18.84■□□□□ 0.61
USP39-203ENST00000409470 CPNE3O75131 537 aaKnown RBP18.84■□□□□ 0.61
USP39-203ENST00000409470 HIST1H2ABP04908 130 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 RPS5P46782 204 aaKnown RBP18.84■□□□□ 0.61
USP39-203ENST00000409470 ACTC1P68032 377 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 ACTA1P68133 377 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 BDH1Q02338 343 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 ZNF45Q02386 682 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 LTBQ06643 244 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 ALG10Q5BKT4 473 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 LCN1P1Q5VSP4 162 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 HIST3H2AQ7L7L0 130 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 AGBL5Q8NDL9 886 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 OR51L1Q8NGJ5 315 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 NUBPLQ8TB37 319 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 DUSP19Q8WTR2 217 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 SMAP2Q8WU79 429 aaPredicted RBP18.84■□□□□ 0.61
USP39-203ENST00000409470 HIST1H2ACQ93077 130 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 SMURF1Q9HCE7 757 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 TRIM36Q9NQ86 728 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 TRDV1A0A1B0GX56 115 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 TMEM221A6NGB7 291 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 M0R296 226 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 CTDSP2O14595 271 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 SLC25A12O75746 678 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 MT-ND5P03915 603 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 HLA-DPB1P04440 258 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 ASAH2BP0C7U1 165 aa18.84■□□□□ 0.61
USP39-203ENST00000409470 FGF9P31371 208 aaPredicted RBP18.84■□□□□ 0.61
USP39-203ENST00000409470 TRA2AQ13595 282 aaKnown RBP eCLIP18.84■□□□□ 0.61
USP39-203ENST00000409470 PON3Q15166 354 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms