RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 IDUAP35475 653 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 OR2B6P58173 313 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 H3F3AP84243 136 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 C1orf140Q5VVS0 124 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 LSRQ86X29 649 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 RBM45Q8IUH3 476 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 OR6K3Q8NGY3 331 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 VANGL1Q8TAA9 524 aaPredicted RBP17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 RNASE6Q93091 150 aaKnown RBP17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 DNAJA3Q96EY1 480 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 KLHL13Q9P2N7 655 aa17.7■□□□□ 0.42
PDLIM2-207ENST00000409417 LIPT2A6NK58 231 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 A8MXE2 369 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 SMNDC1O75940 238 aaKnown RBP eCLIP17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 GPIP06744 558 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 YES1P07947 543 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 CD8BP10966 210 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 KLK2P20151 261 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 CALB2P22676 271 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 CDH12P55289 794 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 SELENOWP63302 87 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 MXRA7P84157 204 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 SAMD4BQ5PRF9 694 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 LUZP2Q86TE4 346 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 CARM1Q86X55 608 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 LZICQ8WZA0 190 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 CDRT15Q96T59 188 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 BCO1Q9HAY6 547 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 ADPRHL2Q9NX46 363 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 A0A087WUJ7 227 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 B2RBV5 119 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 HSD17B1P14061 328 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 GGT1P19440 569 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 FPR1P21462 350 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 AGTR1P30556 359 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 UQCRC1P31930 480 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 CPOXP36551 454 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 EGR4Q05215 589 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 RASGEF1BQ0VAM2 473 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 PDK3Q15120 406 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 SPATS1Q496A3 300 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 ENTPD8Q5MY95 495 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 TMEM201Q5SNT2 666 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 C5orf46Q6UWT4 87 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 TRPM8Q7Z2W7 1104 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 TUSC5Q8IXB3 177 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 DEFB107AQ8IZN7 70 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 RNF148Q8N7C7 305 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 ADAMTS16Q8TE57 1224 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 TPD52L3Q96J77 140 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 PSD2Q9BQI7 771 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 TACO1Q9BSH4 297 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 RBM24Q9BX46 236 aaKnown RBP17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 PLSCR4Q9NRQ2 329 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 ING1Q9UK53 422 aaPredicted RBP17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 PROCRQ9UNN8 238 aa17.69■□□□□ 0.42
PDLIM2-207ENST00000409417 HCFC1P51610 2035 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 NOTCH2Q04721 2471 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 HNRNPRO43390 633 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 AHSA1O95433 338 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 T-ENOLP0DO92 83 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 COX6B1P14854 86 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 CEACAM7Q14002 265 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 FXNQ16595 210 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 ABLIM2Q6H8Q1 611 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 PAQR6Q6TCH4 344 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 MEX3BQ6ZN04 569 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 RBM15BQ8NDT2 890 aaKnown RBP17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 PIGXQ8TBF5 258 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 RNF217Q8TC41 542 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 NAA11Q9BSU3 229 aaPredicted RBP17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 TAPBPLQ9BX59 468 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 OPN3Q9H1Y3 402 aaPredicted RBP17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 CD300AQ9UGN4 299 aa17.68■□□□□ 0.42
PDLIM2-207ENST00000409417 IGKV1D-42A0A075B6H8 117 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 IGKV3D-15A0A087WSY6 115 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 TRAPPC13A5PLN9 417 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 CPSF4LA6NMK7 179 aaKnown RBP17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 ZNF724A8MTY0 619 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 ZNF814B7Z6K7 855 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 CHP2O43745 196 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 NCK1P16333 377 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 TNFRSF1BP20333 461 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 PEX19P40855 299 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 OR1E2P47887 323 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 OR7A5Q15622 319 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 ZNF787Q6DD87 383 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 ZNF474Q6S9Z5 364 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 CBLL1Q75N03 491 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 TSPYL5Q86VY4 417 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 KIF18BQ86Y91 864 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 CCDC103Q8IW40 242 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 DMRTC2Q8IXT2 367 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 MFSD8Q8NHS3 518 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 FAM162AQ96A26 154 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 KTI12Q96EK9 354 aaPredicted RBP17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 PTDSS2Q9BVG9 487 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 GALNT8Q9NY28 637 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 EGFL7Q9UHF1 273 aa17.67■□□□□ 0.42
PDLIM2-207ENST00000409417 MPDZO75970 2070 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms